RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 PIN1P1O15428 100 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 KBTBD11O94819 623 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 LIPFP07098 398 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 FAM27E3Q08E93 113 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 PQLC2Q6ZP29 291 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 NUP37Q8NFH4 326 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 JPT1Q9UK76 154 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 LINC00862A6NCI5 91 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 A6NDN8 102 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 KLK2P20151 261 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 SGK494Q96LW2 274 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 RALYQ9UKM9 306 aaKnown RBP11.3□□□□□ -0.6
SCN8A-202ENST00000355133 LOC102724200A0A096LPH7 203 aaPredicted RBP11.3□□□□□ -0.6
SCN8A-202ENST00000355133 COX5BP10606 129 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 ZNF818PQ6ZRF7 136 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 ZNRF1Q8ND25 227 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 Q96M66 194 aa11.3□□□□□ -0.6
SCN8A-202ENST00000355133 H7C2G1 150 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 CX3CL1P78423 397 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 FXYD3Q14802 87 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 SCARF2Q96GP6 870 aaPredicted RBP11.29□□□□□ -0.6
SCN8A-202ENST00000355133 PHLDA3Q9Y5J5 127 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 COL24A1Q17RW2 1714 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 TNFRSF9Q07011 255 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 DNAJC4Q9NNZ3 241 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 MIA3Q5JRA6 1907 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 B9A039 149 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 KLF4O43474 513 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 SAXO1Q8IYX7 474 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 ZNF729A6NN14 1252 aaPredicted RBP11.29□□□□□ -0.6
SCN8A-202ENST00000355133 NPIPB6E9PJ23 425 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 SIGLEC5O15389 551 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 IGKV3-20P01619 116 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 EGR4Q05215 589 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 HERPUD1Q15011 391 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 ARL6IP6Q8N6S5 226 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 LSM10Q969L4 123 aaKnown RBP11.29□□□□□ -0.6
SCN8A-202ENST00000355133 ELOVL5Q9NYP7 299 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 ANOS1P23352 680 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 PTGDSP41222 190 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 IGLV3-21P80748 117 aaPredicted RBP11.29□□□□□ -0.6
SCN8A-202ENST00000355133 OR4C13Q8NGP0 309 aa11.29□□□□□ -0.6
SCN8A-202ENST00000355133 UNC13CQ8NB66 2214 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 RAMP1O60894 148 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 ARL14EPLP0DKL9 152 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 OR5P3Q8WZ94 311 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 NRIP2Q9BQI9 281 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 STRCP1A6NGW2 1772 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 IGHV3OR16-13A0A075B7E8 117 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 IGHV3-74A0A0B4J1X5 117 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 IGHV3-23P01764 117 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 PSG9Q00887 426 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 CSRP2Q16527 193 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 C2orf83Q53S99 150 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 TMEM186Q96B77 213 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 ZNF25P17030 456 aaPredicted RBP11.28□□□□□ -0.6
SCN8A-202ENST00000355133 TMEM177Q53S58 311 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 Q6ZT83 130 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 TRAV30A0A087WSZ9 112 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 PF4P02776 101 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 GPX1P07203 203 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 MEF2BQ02080 365 aaPredicted RBP11.28□□□□□ -0.6
SCN8A-202ENST00000355133 RAB37Q96AX2 223 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 ELOVL1Q9BW60 279 aa11.28□□□□□ -0.6
SCN8A-202ENST00000355133 NPIPB11E5RHQ5 1161 aa11.27□□□□□ -0.6
SCN8A-202ENST00000355133 IGHMP01871 453 aa11.27□□□□□ -0.6
SCN8A-202ENST00000355133 CD99P14209 185 aa11.27□□□□□ -0.6
SCN8A-202ENST00000355133 LCN2P80188 198 aa11.27□□□□□ -0.6
SCN8A-202ENST00000355133 PRSS8Q16651 343 aa11.27□□□□□ -0.6
SCN8A-202ENST00000355133 ATG101Q9BSB4 218 aa11.27□□□□□ -0.6
SCN8A-202ENST00000355133 OR51M1Q9H341 326 aa11.27□□□□□ -0.6
SCN8A-202ENST00000355133 C5orf66Q9H5L9 145 aa11.27□□□□□ -0.6
SCN8A-202ENST00000355133 AKIRIN1Q9H9L7 192 aaPredicted RBP11.27□□□□□ -0.6
SCN8A-202ENST00000355133 TCF19Q9Y242 345 aa11.27□□□□□ -0.6
SCN8A-202ENST00000355133 IGKV3OR2-268A0A0C4DH90 116 aa11.27□□□□□ -0.6
SCN8A-202ENST00000355133 APOBEC3AP31941 199 aaPredicted RBP11.27□□□□□ -0.6
SCN8A-202ENST00000355133 ZXDCQ2QGD7 858 aaPredicted RBP11.27□□□□□ -0.6
SCN8A-202ENST00000355133 RPL39P5Q59GN2 51 aa11.27□□□□□ -0.6
SCN8A-202ENST00000355133 ZNF703Q9H7S9 590 aaPredicted RBP11.27□□□□□ -0.6
SCN8A-202ENST00000355133 NUDT3O95989 172 aa11.27□□□□□ -0.61
SCN8A-202ENST00000355133 EEF1AKMT3Q96AZ1 226 aa11.27□□□□□ -0.61
SCN8A-202ENST00000355133 NEU1Q99519 415 aa11.27□□□□□ -0.61
SCN8A-202ENST00000355133 MYO16Q9Y6X6 1858 aa11.27□□□□□ -0.61
SCN8A-202ENST00000355133 LY75O60449 1722 aa11.27□□□□□ -0.61
SCN8A-202ENST00000355133 FOXH1O75593 365 aa11.27□□□□□ -0.61
SCN8A-202ENST00000355133 IFI6P09912 130 aa11.27□□□□□ -0.61
SCN8A-202ENST00000355133 SH3BGRL3Q9H299 93 aa11.27□□□□□ -0.61
SCN8A-202ENST00000355133 COL11A2P13942 1736 aaPredicted RBP11.27□□□□□ -0.61
SCN8A-202ENST00000355133 HSPB1P04792 205 aaKnown RBP11.27□□□□□ -0.61
SCN8A-202ENST00000355133 C8orf88P0DMB2 117 aa11.27□□□□□ -0.61
SCN8A-202ENST00000355133 FAM201AQ5SY85 155 aa11.27□□□□□ -0.61
SCN8A-202ENST00000355133 LINC01590Q5TEZ4 76 aa11.27□□□□□ -0.61
SCN8A-202ENST00000355133 FAM74A4Q5TZK3 123 aa11.27□□□□□ -0.61
SCN8A-202ENST00000355133 SRSF12Q8WXF0 261 aaKnown RBP11.27□□□□□ -0.61
SCN8A-202ENST00000355133 RARRES2Q99969 163 aa11.27□□□□□ -0.61
SCN8A-202ENST00000355133 CHCHD2Q9Y6H1 151 aaPredicted RBP11.27□□□□□ -0.61
SCN8A-202ENST00000355133 TDRD15B5MCY1 1934 aaKnown RBP11.26□□□□□ -0.61
SCN8A-202ENST00000355133 WDR25Q64LD2 544 aaPredicted RBP11.26□□□□□ -0.61
SCN8A-202ENST00000355133 NPIPB3Q92617 1050 aa11.26□□□□□ -0.61
SCN8A-202ENST00000355133 MOSP00540 346 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms