RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 SLC35D1Q9NTN3 355 aa16.72■□□□□ 0.27
TRIM4-202ENST00000354241 NSG2Q9Y328 171 aa16.72■□□□□ 0.27
TRIM4-202ENST00000354241 A8MXK9 166 aa16.71■□□□□ 0.27
TRIM4-202ENST00000354241 WRBO00258 174 aa16.71■□□□□ 0.27
TRIM4-202ENST00000354241 SSSCA1O60232 199 aa16.71■□□□□ 0.27
TRIM4-202ENST00000354241 P0C879 139 aa16.71■□□□□ 0.27
TRIM4-202ENST00000354241 S100A1P23297 94 aa16.71■□□□□ 0.27
TRIM4-202ENST00000354241 ID3Q02535 119 aa16.71■□□□□ 0.27
TRIM4-202ENST00000354241 HLA-DRB5Q30154 266 aa16.71■□□□□ 0.27
TRIM4-202ENST00000354241 FAM71F2Q6NXP2 309 aa16.71■□□□□ 0.27
TRIM4-202ENST00000354241 SSX9Q7RTT3 188 aa16.71■□□□□ 0.27
TRIM4-202ENST00000354241 OR13D1Q8NGV5 346 aa16.71■□□□□ 0.27
TRIM4-202ENST00000354241 ZC4H2Q9NQZ6 224 aa16.71■□□□□ 0.27
TRIM4-202ENST00000354241 ZNF137PP52743 207 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 KRTAP10-9P60411 292 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 ERVK-16P61578 105 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 RTL8BQ17RB0 113 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 OR8H1Q8NGG4 311 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 ST6GALNAC6Q969X2 333 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 RBMXL1Q96E39 390 aaKnown RBP16.7■□□□□ 0.26
TRIM4-202ENST00000354241 AQP10Q96PS8 301 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 GSX2Q9BZM3 304 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 IGHV4-30-2A0A087WSY4 118 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 KANTRA0A1W2PQU2 76 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 VWC2LB2RUY7 222 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 IGLV1-47P01700 117 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 PAX1P15863 534 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 NQO2P16083 231 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 PVALBP20472 110 aaPredicted RBP16.7■□□□□ 0.26
TRIM4-202ENST00000354241 TGIF2LXQ8IUE1 241 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 VKORC1L1Q8N0U8 176 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 KIR3DL3Q8N743 410 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 BEND2Q8NDZ0 799 aa16.7■□□□□ 0.26
TRIM4-202ENST00000354241 IGHV4-61A0A0C4DH41 118 aa16.69■□□□□ 0.26
TRIM4-202ENST00000354241 IGHV2-70DA0A0C4DH43 119 aa16.69■□□□□ 0.26
TRIM4-202ENST00000354241 APOA2P02652 100 aa16.69■□□□□ 0.26
TRIM4-202ENST00000354241 HKR1P10072 659 aa16.69■□□□□ 0.26
TRIM4-202ENST00000354241 RPL12P30050 165 aaKnown RBP16.69■□□□□ 0.26
TRIM4-202ENST00000354241 VAMP2P63027 116 aa16.69■□□□□ 0.26
TRIM4-202ENST00000354241 COA4Q9NYJ1 87 aa16.69■□□□□ 0.26
TRIM4-202ENST00000354241 BCL2L11O43521 198 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 FOXH1O75593 365 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 PAX2Q02962 417 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 KLRD1Q13241 179 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 MIDNQ504T8 468 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 NABP2Q9BQ15 211 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 LPAR2Q9HBW0 351 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 MMP26Q9NRE1 261 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 AMMECR1Q9Y4X0 333 aaPredicted RBP16.68■□□□□ 0.26
TRIM4-202ENST00000354241 H0YJW9 148 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 BUB1B-PAK6H3BSN5 160 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 H7C2Y5 167 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 RBMXL2O75526 392 aaKnown RBP16.68■□□□□ 0.26
TRIM4-202ENST00000354241 PRTN3P24158 256 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 P2RY1P47900 373 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 VMO1Q7Z5L0 202 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 MARVELD3Q96A59 401 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.68■□□□□ 0.26
TRIM4-202ENST00000354241 KPTNQ9Y664 436 aa16.68■□□□□ 0.26
TRIM4-202ENST00000354241 FAM157AC9JC47 383 aa16.67■□□□□ 0.26
TRIM4-202ENST00000354241 CHST1O43916 411 aa16.67■□□□□ 0.26
TRIM4-202ENST00000354241 ARG1P05089 322 aa16.67■□□□□ 0.26
TRIM4-202ENST00000354241 OR9G9P0C7N8 305 aa16.67■□□□□ 0.26
TRIM4-202ENST00000354241 DHRS7BQ6IAN0 325 aaPredicted RBP16.67■□□□□ 0.26
TRIM4-202ENST00000354241 C1orf122Q6ZSJ8 110 aa16.67■□□□□ 0.26
TRIM4-202ENST00000354241 OR4P4Q8NGL7 312 aa16.67■□□□□ 0.26
TRIM4-202ENST00000354241 ARPC5LQ9BPX5 153 aa16.67■□□□□ 0.26
TRIM4-202ENST00000354241 C11orf1Q9H5F2 150 aa16.67■□□□□ 0.26
TRIM4-202ENST00000354241 SPG11Q96JI7 2443 aa16.67■□□□□ 0.26
TRIM4-202ENST00000354241 IGKV1-16P04430 117 aa16.66■□□□□ 0.26
TRIM4-202ENST00000354241 RRASP10301 218 aa16.66■□□□□ 0.26
TRIM4-202ENST00000354241 DSCR9P59020 149 aa16.66■□□□□ 0.26
TRIM4-202ENST00000354241 TAGLNQ01995 201 aaKnown RBP16.66■□□□□ 0.26
TRIM4-202ENST00000354241 TEX261Q6UWH6 196 aa16.66■□□□□ 0.26
TRIM4-202ENST00000354241 OR5AN1Q8NGI8 311 aa16.66■□□□□ 0.26
TRIM4-202ENST00000354241 TMEM140Q9NV12 185 aa16.66■□□□□ 0.26
TRIM4-202ENST00000354241 U3KQ87 197 aa16.66■□□□□ 0.26
TRIM4-202ENST00000354241 CRYBG3Q68DQ2 2970 aa16.66■□□□□ 0.26
TRIM4-202ENST00000354241 HRASP01112 189 aa16.66■□□□□ 0.26
TRIM4-202ENST00000354241 PDZD9Q8IXQ8 264 aa16.66■□□□□ 0.26
TRIM4-202ENST00000354241 DOPEY2Q9Y3R5 2298 aa16.66■□□□□ 0.26
TRIM4-202ENST00000354241 SYNGR2O43760 224 aa16.65■□□□□ 0.26
TRIM4-202ENST00000354241 GPR137BO60478 399 aa16.65■□□□□ 0.26
TRIM4-202ENST00000354241 CAV2P51636 162 aa16.65■□□□□ 0.26
TRIM4-202ENST00000354241 OR2B8PP59922 312 aa16.65■□□□□ 0.26
TRIM4-202ENST00000354241 CLEC12BQ2HXU8 276 aa16.65■□□□□ 0.26
TRIM4-202ENST00000354241 SLC51BQ86UW2 128 aa16.65■□□□□ 0.26
TRIM4-202ENST00000354241 OR11H6Q8NGC7 330 aa16.65■□□□□ 0.26
TRIM4-202ENST00000354241 RHOVQ96L33 236 aa16.65■□□□□ 0.26
TRIM4-202ENST00000354241 PSMG3-AS1Q96PY0 264 aa16.65■□□□□ 0.26
TRIM4-202ENST00000354241 PCGF1Q9BSM1 259 aa16.65■□□□□ 0.26
TRIM4-202ENST00000354241 ZNF471Q9BX82 626 aaPredicted RBP16.65■□□□□ 0.26
TRIM4-202ENST00000354241 SIRPDQ9H106 197 aa16.65■□□□□ 0.26
TRIM4-202ENST00000354241 USP9YO00507 2555 aaPredicted RBP16.65■□□□□ 0.26
TRIM4-202ENST00000354241 FAM24AA6NFZ4 105 aa16.64■□□□□ 0.26
TRIM4-202ENST00000354241 FAM90A26D6RGX4 464 aa16.64■□□□□ 0.26
TRIM4-202ENST00000354241 SHOXO15266 292 aa16.64■□□□□ 0.26
TRIM4-202ENST00000354241 CFDP00746 253 aaPredicted RBP16.64■□□□□ 0.26
TRIM4-202ENST00000354241 IAPPP10997 89 aa16.64■□□□□ 0.26
TRIM4-202ENST00000354241 MMP9P14780 707 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms