RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 PCSK4Q6UW60 755 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 SHISA5Q8N114 240 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 SRXN1Q9BYN0 137 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 NPFFR1Q9GZQ6 430 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 TUBD1Q9UJT1 453 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 TAF1LQ8IZX4 1826 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 C17orf51A8MQB3 221 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 SRSF7Q16629 238 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL11A1-201ENST00000353414 ZNF645Q8N7E2 425 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 HSPB9Q9BQS6 159 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 IDI2-AS1Q9NZ38 188 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 H3BQ15 152 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 TMEM170BQ5T4T1 132 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 TMEM101Q96IK0 257 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 FANCMQ8IYD8 2048 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 COL11A2P13942 1736 aaPredicted RBP8.6□□□□□ -1.03
COL11A1-201ENST00000353414 CEACAM4O75871 244 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 COX6CP09669 75 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 DNASE2BQ8WZ79 361 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 FAM168AQ92567 244 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 WNT10AQ9GZT5 417 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 PDE6DO43924 150 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 IGKV1D-33P01593 117 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 IGKV1-33P01594 117 aa8.6□□□□□ -1.03
COL11A1-201ENST00000353414 LBHQ53QV2 105 aaPredicted RBP8.6□□□□□ -1.03
COL11A1-201ENST00000353414 SF3B5Q9BWJ5 86 aaKnown RBP8.6□□□□□ -1.03
COL11A1-201ENST00000353414 CXorf51AA0A1B0GTR3 108 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 ARL14EPLP0DKL9 152 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 EEF1AKMT3Q96AZ1 226 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 NEU3Q9UQ49 428 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 M0QZK8 103 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 GGCTO75223 188 aaKnown RBP8.59□□□□□ -1.03
COL11A1-201ENST00000353414 LSM6P62312 80 aaKnown RBP8.59□□□□□ -1.03
COL11A1-201ENST00000353414 CD300CQ08708 224 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 C7orf69Q9H7B7 122 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 RBFOX2O43251 390 aaKnown RBP eCLIP8.59□□□□□ -1.03
COL11A1-201ENST00000353414 BGLAPP02818 100 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 RPL8P62917 257 aaKnown RBP8.59□□□□□ -1.03
COL11A1-201ENST00000353414 TMEM136Q6ZRR5 245 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 GOLT1AQ6ZVE7 132 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 DOCK3Q8IZD9 2030 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 PRR33A8MZF0 331 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 TFF1P04155 84 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 CRYBA2P53672 197 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 IBA57Q5T440 356 aaKnown RBP8.59□□□□□ -1.03
COL11A1-201ENST00000353414 LSM10Q969L4 123 aaKnown RBP8.59□□□□□ -1.03
COL11A1-201ENST00000353414 SSBP3Q9BWW4 388 aaPredicted RBP8.59□□□□□ -1.03
COL11A1-201ENST00000353414 THADAQ6YHU6 1953 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 RNASEH2CQ8TDP1 164 aaKnown RBP8.59□□□□□ -1.03
COL11A1-201ENST00000353414 LINC00527Q9UJ94 153 aa8.59□□□□□ -1.03
COL11A1-201ENST00000353414 A0A0U1RRA0 63 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 NPPCP23582 126 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 GLIPR1P48060 266 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 NPC2P61916 151 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 CIRBPQ14011 172 aaKnown RBP8.58□□□□□ -1.04
COL11A1-201ENST00000353414 NRN1LQ496H8 165 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 ZNF385CQ66K41 422 aaPredicted RBP8.58□□□□□ -1.04
COL11A1-201ENST00000353414 SFTA2Q6UW10 78 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 SLC25A45Q8N413 288 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 KIR3DL3Q8N743 410 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 KLK2P20151 261 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 MPV17P39210 176 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 FXYD7P58549 80 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 ELF5Q9UKW6 265 aaPredicted RBP8.58□□□□□ -1.04
COL11A1-201ENST00000353414 ABCA7Q8IZY2 2146 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 A0A1W2PQF6 199 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 CD1AP06126 327 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 RPL39P5Q59GN2 51 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 BIVMQ86UB2 503 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 STHQ8IWL8 128 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 VGLL1Q99990 258 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 FOXA2Q9Y261 457 aaPredicted RBP8.58□□□□□ -1.04
COL11A1-201ENST00000353414 LYNX1G3V0Z9 82 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 LYNX1P0DP58 116 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 MAP1BP46821 2468 aaKnown RBP8.58□□□□□ -1.04
COL11A1-201ENST00000353414 NPBWR2P48146 333 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 SMAGPQ0VAQ4 97 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 ZCCHC24Q8N2G6 241 aaKnown RBP8.58□□□□□ -1.04
COL11A1-201ENST00000353414 ELOA3CA0A087WX78 387 aaPredicted RBP8.58□□□□□ -1.04
COL11A1-201ENST00000353414 NDUFA3O95167 84 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 DNAL4O96015 105 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 IL4P05112 153 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 IGHV3-64A0A075B6Q5 118 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.58□□□□□ -1.04
COL11A1-201ENST00000353414 CELA3AP09093 270 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 GPR183P32249 361 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 SELENOTP62341 195 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 EFNB1P98172 346 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 UNC119Q13432 240 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 TEX29Q8N6K0 151 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 OR1P1Q8NH06 330 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 MRPL30Q8TCC3 161 aaKnown RBP8.58□□□□□ -1.04
COL11A1-201ENST00000353414 KLF14Q8TD94 323 aaPredicted RBP8.58□□□□□ -1.04
COL11A1-201ENST00000353414 MAP1LC3AQ9H492 121 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 TNFRSF18Q9Y5U5 241 aa8.58□□□□□ -1.04
COL11A1-201ENST00000353414 A0A1W2PPV9 198 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 ATP6V0CP27449 155 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 BSPH1Q075Z2 132 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 OR4D5Q8NGN0 318 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 GP6Q9HCN6 339 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms