RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-204ENST00000353317 M0R1B8 84 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 IGKV1D-33P01593 117 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 IGKV1-33P01594 117 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 OPN1MWP04001 364 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 OPN1MW2P0DN77 364 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 OPN1MW3P0DN78 364 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 FABP6P51161 128 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 CD81P60033 236 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 TMEM41BQ5BJD5 291 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 SPANXN5Q5MJ07 72 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 LINC00596Q86U02 117 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 FAM58AQ8N1B3 248 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 LILRB2Q8N423 598 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 RPP25LQ8N5L8 163 aaKnown RBP7.18□□□□□ -1.26
TRIM55-204ENST00000353317 OR4X1Q8NH49 305 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 HIST1H2AAQ96QV6 131 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 MAP1LC3BQ9GZQ8 125 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 MLNRO43193 412 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 ZNF737O75373 536 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 WNT2P09544 360 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 ZNF16P17020 682 aaPredicted RBP7.18□□□□□ -1.26
TRIM55-204ENST00000353317 HOXC12P31275 282 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 IL2RGP31785 369 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 CA7P43166 264 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 HBG1P69891 147 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 HBG2P69892 147 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 SPRNQ5BIV9 151 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 VKORC1Q9BQB6 163 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 PRO1933Q9H354 126 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 PITPNC1Q9UKF7 332 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 HCFC1P51610 2035 aa7.18□□□□□ -1.26
TRIM55-204ENST00000353317 PIGBOS1A0A0B4J2F0 54 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 UBE2L5PA0A1B0GUS4 154 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 DEGS1O15121 323 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 HMGB3O15347 200 aaKnown RBP7.17□□□□□ -1.26
TRIM55-204ENST00000353317 TGOLN2O43493 480 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 DDTP30046 118 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 ADORA2A-AS1P86434 159 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 ADIRFQ15847 76 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 ZNF573Q86YE8 665 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 ST6GALNAC3Q8NDV1 305 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 OR10A7Q8NGE5 316 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 TAF15Q92804 592 aaKnown RBP eCLIP7.17□□□□□ -1.26
TRIM55-204ENST00000353317 SMIM7Q9BQ49 75 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 CTDSP1Q9GZU7 261 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 UTP20O75691 2785 aaKnown RBP7.17□□□□□ -1.26
TRIM55-204ENST00000353317 ARFGEF3Q5TH69 2177 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 NPIPB11E5RHQ5 1161 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 PFN1P07737 140 aaKnown RBP7.17□□□□□ -1.26
TRIM55-204ENST00000353317 PKIAP61925 76 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 GNG3P63215 75 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 MEF2BQ02080 365 aaPredicted RBP7.17□□□□□ -1.26
TRIM55-204ENST00000353317 DNLZQ5SXM8 178 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 NCR3LG1Q68D85 454 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 Q6P435 159 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 NECAP1Q8NC96 275 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 RND1Q92730 232 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 LHX4Q969G2 390 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 PINX1Q96BK5 328 aaKnown RBP7.17□□□□□ -1.26
TRIM55-204ENST00000353317 MEGF10Q96KG7 1140 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 MSL2Q9HCI7 577 aa7.17□□□□□ -1.26
TRIM55-204ENST00000353317 RBM7Q9Y580 266 aaKnown RBP7.17□□□□□ -1.26
TRIM55-204ENST00000353317 SMCO3A2RU48 225 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 DPRXA6NFQ7 191 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 ANKRD30BLA7E2S9 258 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 CCL21O00585 134 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 RAC2P15153 192 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 GZMHP20718 246 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 COL10A1Q03692 680 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 OR8G2PQ6IF36 304 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 CYP2G1PQ6ZSU1 146 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 C16orf82Q7Z2V1 217 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 TMEM183AQ8IXX5 376 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 FGFRL1Q8N441 504 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 FAM169BQ8N8A8 192 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 WFIKKN1Q96NZ8 548 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 SRD5A3Q9H8P0 318 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 OBP2BQ9NPH6 170 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 SLC39A9Q9NUM3 307 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 UFSP2Q9NUQ7 469 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 NAT8Q9UHE5 227 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 KCNS2Q9ULS6 477 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 A0A087X0M5 115 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 A0A1B0GV90 55 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 A0A1B0GX30 115 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 LRP5LA4QPB2 252 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 OR5B21A6NL26 309 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 IQCF6A8MYZ5 107 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 TSTD3H0UI37 97 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 C16orf97H3BN30 126 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 UQCRFS1P47985 274 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 RPL23P62829 140 aaKnown RBP7.16□□□□□ -1.26
TRIM55-204ENST00000353317 SLC38A11Q08AI6 406 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 TMEM241Q24JQ0 296 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 ACSM6Q6P461 480 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 C11orf53Q8IXP5 236 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 OR51G1Q8NGK1 321 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 RPUSD4Q96CM3 377 aaKnown RBP7.16□□□□□ -1.26
TRIM55-204ENST00000353317 PYGO2Q9BRQ0 406 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms