RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 Q3ZCU0 254 aa20.45■□□□□ 0.86
CPNE1-202ENST00000352393 INO80CQ6PI98 192 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-202ENST00000352393 WDR31Q8NA23 367 aa20.45■□□□□ 0.86
CPNE1-202ENST00000352393 OR13A1Q8NGR1 328 aa20.45■□□□□ 0.86
CPNE1-202ENST00000352393 CXXC4Q9H2H0 198 aa20.45■□□□□ 0.86
CPNE1-202ENST00000352393 WDR83OSQ9Y284 106 aa20.45■□□□□ 0.86
CPNE1-202ENST00000352393 MKRN2OSH3BPM6 223 aa20.45■□□□□ 0.86
CPNE1-202ENST00000352393 LINC00205P59089 165 aa20.45■□□□□ 0.86
CPNE1-202ENST00000352393 TMEM249Q2WGJ8 235 aa20.45■□□□□ 0.86
CPNE1-202ENST00000352393 WDR82Q6UXN9 313 aa20.45■□□□□ 0.86
CPNE1-202ENST00000352393 LURAP1Q96LR2 239 aa20.45■□□□□ 0.86
CPNE1-202ENST00000352393 FER1L6-AS2Q96M78 137 aa20.45■□□□□ 0.86
CPNE1-202ENST00000352393 A0A087X0M5 115 aa20.44■□□□□ 0.86
CPNE1-202ENST00000352393 A0A1B0GX30 115 aa20.44■□□□□ 0.86
CPNE1-202ENST00000352393 RBMXL2O75526 392 aaKnown RBP20.44■□□□□ 0.86
CPNE1-202ENST00000352393 NUBP1P53384 320 aa20.44■□□□□ 0.86
CPNE1-202ENST00000352393 CLEC12BQ2HXU8 276 aa20.44■□□□□ 0.86
CPNE1-202ENST00000352393 OR6C3Q9NZP0 311 aa20.44■□□□□ 0.86
CPNE1-202ENST00000352393 METRNQ9UJH8 293 aa20.44■□□□□ 0.86
CPNE1-202ENST00000352393 IGHV3-43A0A0B4J1X8 118 aa20.44■□□□□ 0.86
CPNE1-202ENST00000352393 ST8SIA5O15466 376 aa20.44■□□□□ 0.86
CPNE1-202ENST00000352393 IGHV3-43DP0DP04 118 aa20.44■□□□□ 0.86
CPNE1-202ENST00000352393 AARDQ4LEZ3 155 aa20.44■□□□□ 0.86
CPNE1-202ENST00000352393 PRAMEF6Q5VXH4 476 aa20.44■□□□□ 0.86
CPNE1-202ENST00000352393 QTRT1Q9BXR0 403 aaKnown RBP20.44■□□□□ 0.86
CPNE1-202ENST00000352393 TECTAO75443 2155 aa20.43■□□□□ 0.86
CPNE1-202ENST00000352393 TNFSF15O95150 251 aa20.43■□□□□ 0.86
CPNE1-202ENST00000352393 CISD2Q8N5K1 135 aaKnown RBP20.43■□□□□ 0.86
CPNE1-202ENST00000352393 TPRX1Q8N7U7 411 aa20.43■□□□□ 0.86
CPNE1-202ENST00000352393 RAB1CQ92928 201 aa20.43■□□□□ 0.86
CPNE1-202ENST00000352393 CLCF1Q9UBD9 225 aa20.43■□□□□ 0.86
CPNE1-202ENST00000352393 PSG11Q9UQ72 335 aa20.43■□□□□ 0.86
CPNE1-202ENST00000352393 FUT9Q9Y231 359 aa20.43■□□□□ 0.86
CPNE1-202ENST00000352393 R3HDM4Q96D70 268 aa20.42■□□□□ 0.86
CPNE1-202ENST00000352393 ARRDC1-AS1Q9H2J1 176 aa20.42■□□□□ 0.86
CPNE1-202ENST00000352393 ZDBF2Q9HCK1 2354 aa20.42■□□□□ 0.86
CPNE1-202ENST00000352393 IFNL4K9M1U5 179 aa20.42■□□□□ 0.86
CPNE1-202ENST00000352393 TMPRSS2O15393 492 aa20.42■□□□□ 0.86
CPNE1-202ENST00000352393 OR9G9P0C7N8 305 aa20.42■□□□□ 0.86
CPNE1-202ENST00000352393 GNB1P62873 340 aa20.42■□□□□ 0.86
CPNE1-202ENST00000352393 LINC01551Q86U37 167 aa20.42■□□□□ 0.86
CPNE1-202ENST00000352393 GCNT2Q8N0V5 402 aa20.42■□□□□ 0.86
CPNE1-202ENST00000352393 LNP1A1A4G5 178 aa20.41■□□□□ 0.86
CPNE1-202ENST00000352393 C15orf65H3BRN8 121 aa20.41■□□□□ 0.86
CPNE1-202ENST00000352393 PDE6DO43924 150 aa20.41■□□□□ 0.86
CPNE1-202ENST00000352393 CD99P14209 185 aa20.41■□□□□ 0.86
CPNE1-202ENST00000352393 FOXF2Q12947 444 aa20.41■□□□□ 0.86
CPNE1-202ENST00000352393 GCSAMLQ5JQS6 135 aa20.41■□□□□ 0.86
CPNE1-202ENST00000352393 KCNIP4Q6PIL6 250 aa20.41■□□□□ 0.86
CPNE1-202ENST00000352393 CD1BP29016 333 aa20.41■□□□□ 0.86
CPNE1-202ENST00000352393 LCN2P80188 198 aa20.41■□□□□ 0.86
CPNE1-202ENST00000352393 Q6ZT83 130 aa20.41■□□□□ 0.86
CPNE1-202ENST00000352393 MEGF10Q96KG7 1140 aa20.41■□□□□ 0.86
CPNE1-202ENST00000352393 WASF3Q9UPY6 502 aa20.41■□□□□ 0.86
CPNE1-202ENST00000352393 IGKV3-15P01624 115 aa20.4■□□□□ 0.86
CPNE1-202ENST00000352393 CD82P27701 267 aa20.4■□□□□ 0.86
CPNE1-202ENST00000352393 ATP5G3P48201 142 aa20.4■□□□□ 0.86
CPNE1-202ENST00000352393 HTD2P86397 168 aa20.4■□□□□ 0.86
CPNE1-202ENST00000352393 CACNA1DQ01668 2161 aa20.4■□□□□ 0.86
CPNE1-202ENST00000352393 PAX5Q02548 391 aa20.4■□□□□ 0.86
CPNE1-202ENST00000352393 SMIM21Q3B7S5 101 aa20.4■□□□□ 0.86
CPNE1-202ENST00000352393 RFESDQ8TAC1 157 aa20.4■□□□□ 0.86
CPNE1-202ENST00000352393 KCNIP2Q9NS61 270 aa20.4■□□□□ 0.86
CPNE1-202ENST00000352393 TRAV38-1A0A0B4J264 116 aa20.39■□□□□ 0.86
CPNE1-202ENST00000352393 DEFB108AA8MXU0 73 aa20.39■□□□□ 0.86
CPNE1-202ENST00000352393 SOX15O60248 233 aa20.39■□□□□ 0.86
CPNE1-202ENST00000352393 CRYAAP02489 173 aa20.39■□□□□ 0.86
CPNE1-202ENST00000352393 CHRNA7P36544 502 aa20.39■□□□□ 0.86
CPNE1-202ENST00000352393 ATP1A1-AS1Q5TC04 95 aa20.39■□□□□ 0.86
CPNE1-202ENST00000352393 TMEM37Q8WXS4 190 aa20.39■□□□□ 0.86
CPNE1-202ENST00000352393 FAM90A9PA6NNJ1 464 aa20.39■□□□□ 0.85
CPNE1-202ENST00000352393 GCGP01275 180 aa20.39■□□□□ 0.85
CPNE1-202ENST00000352393 IL3RAP26951 378 aa20.39■□□□□ 0.85
CPNE1-202ENST00000352393 DUTP33316 252 aaKnown RBP20.39■□□□□ 0.85
CPNE1-202ENST00000352393 ARG2P78540 354 aa20.39■□□□□ 0.85
CPNE1-202ENST00000352393 GUSBP1Q15486 140 aa20.39■□□□□ 0.85
CPNE1-202ENST00000352393 TRAT1Q6PIZ9 186 aa20.39■□□□□ 0.85
CPNE1-202ENST00000352393 TMEM144Q7Z5S9 345 aa20.39■□□□□ 0.85
CPNE1-202ENST00000352393 ADH4P08319 380 aa20.38■□□□□ 0.85
CPNE1-202ENST00000352393 KITLGP21583 273 aa20.38■□□□□ 0.85
CPNE1-202ENST00000352393 FAM214BQ7L5A3 538 aa20.38■□□□□ 0.85
CPNE1-202ENST00000352393 SSX9Q7RTT3 188 aa20.38■□□□□ 0.85
CPNE1-202ENST00000352393 TMEM178AQ8NBL3 297 aa20.38■□□□□ 0.85
CPNE1-202ENST00000352393 DCTN5Q9BTE1 182 aa20.38■□□□□ 0.85
CPNE1-202ENST00000352393 HCFC1P51610 2035 aa20.38■□□□□ 0.85
CPNE1-202ENST00000352393 SPINT2O43291 252 aa20.38■□□□□ 0.85
CPNE1-202ENST00000352393 GALR2O43603 387 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-202ENST00000352393 PROP1O75360 226 aa20.38■□□□□ 0.85
CPNE1-202ENST00000352393 AGFG2O95081 481 aa20.38■□□□□ 0.85
CPNE1-202ENST00000352393 CD59P13987 128 aa20.38■□□□□ 0.85
CPNE1-202ENST00000352393 EGR1P18146 543 aa20.38■□□□□ 0.85
CPNE1-202ENST00000352393 PRSS8Q16651 343 aa20.38■□□□□ 0.85
CPNE1-202ENST00000352393 FAM78BQ5VT40 261 aa20.38■□□□□ 0.85
CPNE1-202ENST00000352393 F6UZH7 168 aa20.37■□□□□ 0.85
CPNE1-202ENST00000352393 TIMM8AO60220 97 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-202ENST00000352393 MPDU1O75352 247 aa20.37■□□□□ 0.85
CPNE1-202ENST00000352393 UBE2G2P60604 165 aa20.37■□□□□ 0.85
CPNE1-202ENST00000352393 RPL15P61313 204 aaKnown RBP20.37■□□□□ 0.85
CPNE1-202ENST00000352393 CD177Q8N6Q3 437 aa20.37■□□□□ 0.85
CPNE1-202ENST00000352393 OR5T1Q8NG75 326 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms