RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CBX3Q13185 183 aa17.31■□□□□ 0.36
SNX3-202ENST00000349379 PLGLAQ15195 96 aa17.31■□□□□ 0.36
SNX3-202ENST00000349379 DHRS11Q6UWP2 260 aa17.31■□□□□ 0.36
SNX3-202ENST00000349379 KCTD9Q7L273 389 aa17.31■□□□□ 0.36
SNX3-202ENST00000349379 EHFQ9NZC4 300 aa17.31■□□□□ 0.36
SNX3-202ENST00000349379 G3V318 75 aa17.3■□□□□ 0.36
SNX3-202ENST00000349379 CTDSP2O14595 271 aa17.3■□□□□ 0.36
SNX3-202ENST00000349379 EGR2P11161 476 aaPredicted RBP17.3■□□□□ 0.36
SNX3-202ENST00000349379 PSMB8P28062 276 aa17.3■□□□□ 0.36
SNX3-202ENST00000349379 RFX2P48378 723 aa17.3■□□□□ 0.36
SNX3-202ENST00000349379 SSBP2P81877 361 aaPredicted RBP17.3■□□□□ 0.36
SNX3-202ENST00000349379 KHDC1LQ5JSQ8 128 aa17.3■□□□□ 0.36
SNX3-202ENST00000349379 ZNF562Q6V9R5 426 aa17.3■□□□□ 0.36
SNX3-202ENST00000349379 ZNF66Q6ZN08 573 aa17.3■□□□□ 0.36
SNX3-202ENST00000349379 ZBTB34Q8NCN2 500 aa17.3■□□□□ 0.36
SNX3-202ENST00000349379 OSR1Q8TAX0 266 aaPredicted RBP17.3■□□□□ 0.36
SNX3-202ENST00000349379 SECTM1Q8WVN6 248 aa17.3■□□□□ 0.36
SNX3-202ENST00000349379 CCL28Q9NRJ3 127 aa17.3■□□□□ 0.36
SNX3-202ENST00000349379 TRAV41A0A0B4J266 112 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 SHOXO15266 292 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 NOL3O60936 208 aaKnown RBP17.29■□□□□ 0.36
SNX3-202ENST00000349379 CRYZL1O95825 349 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 CA2P00918 260 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 PMP2P02689 132 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 RCVRNP35243 200 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 BRWD1-AS2P59051 145 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 MRGPRG-AS1Q2M3A8 158 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 PPP1R27Q86WC6 154 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 LAX1Q8IWV1 398 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 MINDY2Q8NBR6 621 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 OR5H2Q8NGV7 314 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 MYOZ3Q8TDC0 251 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 SLIRPQ9GZT3 109 aaKnown RBP17.29■□□□□ 0.36
SNX3-202ENST00000349379 PRELID3BQ9Y3B1 194 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 NUBP2Q9Y5Y2 271 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 WSB1Q9Y6I7 421 aa17.29■□□□□ 0.36
SNX3-202ENST00000349379 IGLV1-40P01703 118 aa17.28■□□□□ 0.36
SNX3-202ENST00000349379 RPLP1P05386 114 aaKnown RBP17.28■□□□□ 0.36
SNX3-202ENST00000349379 SLC6A1P30531 599 aa17.28■□□□□ 0.36
SNX3-202ENST00000349379 HRH1P35367 487 aa17.28■□□□□ 0.36
SNX3-202ENST00000349379 CXorf66Q5JRM2 361 aaPredicted RBP17.28■□□□□ 0.36
SNX3-202ENST00000349379 C18orf65Q6ZTR6 163 aa17.28■□□□□ 0.36
SNX3-202ENST00000349379 MFSD4AQ8N468 514 aa17.28■□□□□ 0.36
SNX3-202ENST00000349379 MOB3AQ96BX8 217 aa17.28■□□□□ 0.36
SNX3-202ENST00000349379 ABHD1Q96SE0 405 aa17.28■□□□□ 0.36
SNX3-202ENST00000349379 SLC5A7Q9GZV3 580 aa17.28■□□□□ 0.36
SNX3-202ENST00000349379 RBM38Q9H0Z9 239 aaKnown RBP17.28■□□□□ 0.36
SNX3-202ENST00000349379 TAS2R8Q9NYW2 309 aa17.28■□□□□ 0.36
SNX3-202ENST00000349379 ARPC1BO15143 372 aaKnown RBP17.27■□□□□ 0.36
SNX3-202ENST00000349379 FCGR3BO75015 233 aa17.27■□□□□ 0.36
SNX3-202ENST00000349379 PF4V1P10720 104 aa17.27■□□□□ 0.36
SNX3-202ENST00000349379 HLA-DMAP28067 261 aa17.27■□□□□ 0.36
SNX3-202ENST00000349379 FXYD4P59646 89 aa17.27■□□□□ 0.36
SNX3-202ENST00000349379 UBE2KP61086 200 aa17.27■□□□□ 0.36
SNX3-202ENST00000349379 LCNL1Q6ZST4 164 aa17.27■□□□□ 0.36
SNX3-202ENST00000349379 TCTEX1D1Q8N7M0 179 aa17.27■□□□□ 0.36
SNX3-202ENST00000349379 TEX45Q8NA69 505 aa17.27■□□□□ 0.36
SNX3-202ENST00000349379 CLCC1Q96S66 551 aa17.27■□□□□ 0.36
SNX3-202ENST00000349379 ZNF2Q9BSG1 426 aaPredicted RBP17.27■□□□□ 0.36
SNX3-202ENST00000349379 RGS5O15539 181 aa17.26■□□□□ 0.35
SNX3-202ENST00000349379 GNRHRP30968 328 aa17.26■□□□□ 0.35
SNX3-202ENST00000349379 ETV3LQ6ZN32 361 aa17.26■□□□□ 0.35
SNX3-202ENST00000349379 OR52I2Q8NH67 350 aa17.26■□□□□ 0.35
SNX3-202ENST00000349379 C15orf40Q8WUR7 153 aa17.26■□□□□ 0.35
SNX3-202ENST00000349379 TCTEX1D2Q8WW35 142 aa17.26■□□□□ 0.35
SNX3-202ENST00000349379 GPHA2Q96T91 129 aa17.26■□□□□ 0.35
SNX3-202ENST00000349379 NXF2Q9GZY0 626 aaKnown RBP17.26■□□□□ 0.35
SNX3-202ENST00000349379 NOTCH3Q9UM47 2321 aa17.26■□□□□ 0.35
SNX3-202ENST00000349379 SOX15O60248 233 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 CDX1P47902 265 aaPredicted RBP17.25■□□□□ 0.35
SNX3-202ENST00000349379 HERV-K104P61576 105 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 PJVKQ0ZLH3 352 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 KIAA0141Q14154 515 aaPredicted RBP17.25■□□□□ 0.35
SNX3-202ENST00000349379 ECSCRQ19T08 205 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 VMA21Q3ZAQ7 101 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 AKIRIN2Q53H80 203 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 OR2B11Q5JQS5 317 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 VAX1Q5SQQ9 334 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 ZNF818PQ6ZRF7 136 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 TMEM17Q86X19 198 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 WFDC9Q8NEX5 89 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 OR4S2Q8NH73 311 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 ARPC1AQ92747 370 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 FAM103A1Q9BTL3 118 aaKnown RBP17.25■□□□□ 0.35
SNX3-202ENST00000349379 FXYD6Q9H0Q3 95 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 KLK11Q9UBX7 282 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 MTFP1Q9UDX5 166 aa17.25■□□□□ 0.35
SNX3-202ENST00000349379 TMEM267Q0VDI3 215 aaPredicted RBP17.24■□□□□ 0.35
SNX3-202ENST00000349379 FXYD3Q14802 87 aa17.24■□□□□ 0.35
SNX3-202ENST00000349379 C8orf86Q6ZUL3 223 aa17.24■□□□□ 0.35
SNX3-202ENST00000349379 ZNF695Q8IW36 515 aa17.24■□□□□ 0.35
SNX3-202ENST00000349379 KLHL30-AS1Q8NEE0 82 aa17.24■□□□□ 0.35
SNX3-202ENST00000349379 OR6F1Q8NGZ6 308 aa17.24■□□□□ 0.35
SNX3-202ENST00000349379 BORCS5Q969J3 196 aa17.24■□□□□ 0.35
SNX3-202ENST00000349379 KLK15Q9H2R5 256 aa17.24■□□□□ 0.35
SNX3-202ENST00000349379 FOXA2Q9Y261 457 aaPredicted RBP17.24■□□□□ 0.35
SNX3-202ENST00000349379 NOTCH1P46531 2555 aa17.23■□□□□ 0.35
SNX3-202ENST00000349379 RBFOX2O43251 390 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNX3-202ENST00000349379 TNFSF12O43508 249 aa17.23■□□□□ 0.35
SNX3-202ENST00000349379 SAA1P0DJI8 122 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms