RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.62□□□□□ -0.55
TRIM4-201ENST00000349062 LCN15Q6UWW0 184 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 HIST1H2BHQ93079 126 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 C14orf144Q96I85 54 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 HIST1H2BNQ99877 126 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 HIST1H2BMQ99879 126 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 MALRD1Q5VYJ5 2156 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 DSCAMO60469 2012 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 A0A0G2JNJ9 132 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 H0Y980 276 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 IGKV1-5P01602 117 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 CD55P08174 381 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 ZNF146Q15072 292 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 NEUROG1Q92886 237 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 ZDHHC16Q969W1 377 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 Q9UFV3 132 aa11.62□□□□□ -0.55
TRIM4-201ENST00000349062 MBD3L4A6NDZ8 208 aaPredicted RBP11.61□□□□□ -0.55
TRIM4-201ENST00000349062 MBD3L3A6NE82 208 aaPredicted RBP11.61□□□□□ -0.55
TRIM4-201ENST00000349062 MBD3L5A6NJ08 208 aaPredicted RBP11.61□□□□□ -0.55
TRIM4-201ENST00000349062 FAM90A27PA6NNH2 459 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 TSTD3H0UI37 97 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 M0R1X1 148 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 DEFA4P12838 97 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 GUSBP1Q15486 140 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 FAM216BQ8N7L0 139 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 MBD3L2Q8NHZ7 208 aaPredicted RBP11.61□□□□□ -0.55
TRIM4-201ENST00000349062 SMCO3A2RU48 225 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 CEBPZOSA8MTT3 80 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 SPINT2O43291 252 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 GCSAMQ8N6F7 178 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 TMEM56Q96MV1 263 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 TUBA4BQ9H853 241 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 TMEM56-RWDD3S4R434 201 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 BSNQ9UPA5 3926 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 TMPRSS2O15393 492 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 TRGC1P0CF51 173 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 G0S2P27469 103 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 NMSQ5H8A3 153 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 SLC25A31Q9H0C2 315 aa11.61□□□□□ -0.55
TRIM4-201ENST00000349062 IGKV1D-17A0A075B6S4 117 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 TMEM210A6NLX4 147 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 GPR12P47775 334 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 ZNF585BQ52M93 769 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 GPR157Q5UAW9 335 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 LINC00596Q86U02 117 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 OR5D13Q8NGL4 314 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 H1FXQ92522 213 aaKnown RBP11.6□□□□□ -0.55
TRIM4-201ENST00000349062 LURAP1Q96LR2 239 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 UBE2L5PA0A1B0GUS4 154 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 OOEPA6NGQ2 149 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 CEACAM4O75871 244 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 IGLV2-14P01704 120 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 MDH2P40926 338 aaKnown RBP11.6□□□□□ -0.55
TRIM4-201ENST00000349062 ELOBQ15370 118 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 SCGB1C1Q8TD33 95 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 FRZBQ92765 325 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 LIN7CQ9NUP9 197 aaKnown RBP11.6□□□□□ -0.55
TRIM4-201ENST00000349062 RAXQ9Y2V3 346 aa11.6□□□□□ -0.55
TRIM4-201ENST00000349062 SYNGR2O43760 224 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 CLDN14O95500 239 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 NBL1P41271 181 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 TIMM23BQ5SRD1 257 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 LRTM2Q8N967 370 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 WASF3Q9UPY6 502 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 STRAPQ9Y3F4 350 aaKnown RBP11.59□□□□□ -0.55
TRIM4-201ENST00000349062 ACACBO00763 2458 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 CLEC18AA5D8T8 446 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 A8MXE2 369 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 IFNA5P01569 189 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 CD40P25942 277 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 CLEC18CQ8NCF0 446 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 FAM57AQ8TBR7 257 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 FAM210BQ96KR6 192 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 ATG101Q9BSB4 218 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 GAB2Q9UQC2 676 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 ARHGAP32A7KAX9 2087 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 LINC00473A8K010 186 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 DDTP30046 118 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 BSPH1Q075Z2 132 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 WDR25Q64LD2 544 aaPredicted RBP11.59□□□□□ -0.55
TRIM4-201ENST00000349062 COMMD1Q8N668 190 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 TVP23CQ96ET8 276 aa11.59□□□□□ -0.55
TRIM4-201ENST00000349062 PACRGQ96M98 296 aaPredicted RBP11.59□□□□□ -0.55
TRIM4-201ENST00000349062 SVEP1Q4LDE5 3571 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 ODAMA1E959 279 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 SEC14L6B5MCN3 397 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 DLX1P56177 255 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 ARL16Q0P5N6 197 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 NCR3LG1Q68D85 454 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 H2BFWTQ7Z2G1 175 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 C1orf162Q8NEQ5 155 aaPredicted RBP11.58□□□□□ -0.56
TRIM4-201ENST00000349062 RND1Q92730 232 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 C5orf30Q96GV9 206 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 WFIKKN1Q96NZ8 548 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 LYRM2Q9NU23 88 aaPredicted RBP11.58□□□□□ -0.56
TRIM4-201ENST00000349062 C16orf97H3BN30 126 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 SNRPCP09234 159 aaKnown RBP11.58□□□□□ -0.56
TRIM4-201ENST00000349062 IRF2P14316 349 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 PAX6P26367 422 aa11.58□□□□□ -0.56
TRIM4-201ENST00000349062 MOB1BQ7L9L4 216 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms