RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 KIR2DS2P43631 304 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 TLE4Q04727 773 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 SLC38A11Q08AI6 406 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 TMEM30BQ3MIR4 351 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 AARDQ4LEZ3 155 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 UTF1Q5T230 341 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 IDI2-AS1Q9NZ38 188 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 A0A1B0GV50 99 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 CCL21O00585 134 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 TMPRSS2O15393 492 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 ZG16O60844 167 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 C1orf87Q8N0U7 546 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 LEAP2Q969E1 77 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 OR4C12Q96R67 309 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 S1PR3Q99500 378 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 RSG1Q9BU20 258 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 SMDT1Q9H4I9 107 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 C1QTNF9P0C862 333 aa16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 CCL20P78556 96 aa16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 DHRS7BQ6IAN0 325 aaPredicted RBP16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 DMRTC2Q8IXT2 367 aaPredicted RBP16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 ZNF439Q8NDP4 499 aa16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 DDB2Q92466 427 aa16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 NEUROG1Q92886 237 aa16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 ZDHHC16Q969W1 377 aa16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 WDR61Q9GZS3 305 aaKnown RBP16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 POLEQ07864 2286 aa16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 OR9G9P0C7N8 305 aa16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 OR8G2PQ6IF36 304 aa16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 C1orf229Q6ZS94 237 aaPredicted RBP16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 RNASE6Q93091 150 aaKnown RBP16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 KIAA1456Q9P272 454 aa16.79■□□□□ 0.28
CHRNA3-202ENST00000348639 TANC2Q9HCD6 1990 aa16.78■□□□□ 0.28
CHRNA3-202ENST00000348639 hADV38S2A0JD32 116 aa16.78■□□□□ 0.28
CHRNA3-202ENST00000348639 E7EQL1 145 aa16.78■□□□□ 0.28
CHRNA3-202ENST00000348639 TMEM178BH3BS89 294 aa16.78■□□□□ 0.28
CHRNA3-202ENST00000348639 ATF4P18848 351 aaPredicted RBP16.78■□□□□ 0.28
CHRNA3-202ENST00000348639 NFYBP25208 207 aa16.78■□□□□ 0.28
CHRNA3-202ENST00000348639 SERF2P84101 59 aa16.78■□□□□ 0.28
CHRNA3-202ENST00000348639 ATP6V1FQ16864 119 aa16.78■□□□□ 0.28
CHRNA3-202ENST00000348639 CLRN3Q8NCR9 226 aa16.78■□□□□ 0.28
CHRNA3-202ENST00000348639 ST6GALNAC3Q8NDV1 305 aa16.78■□□□□ 0.28
CHRNA3-202ENST00000348639 QTRT1Q9BXR0 403 aaKnown RBP16.78■□□□□ 0.28
CHRNA3-202ENST00000348639 LINC00312Q9Y6C7 94 aa16.78■□□□□ 0.28
CHRNA3-202ENST00000348639 SAA2-SAA4A0A096LPE2 208 aa16.77■□□□□ 0.28
CHRNA3-202ENST00000348639 A0A1W2PPE3 182 aa16.77■□□□□ 0.28
CHRNA3-202ENST00000348639 PMS2P5A8MQ11 134 aa16.77■□□□□ 0.28
CHRNA3-202ENST00000348639 CEBPZOSA8MTT3 80 aa16.77■□□□□ 0.28
CHRNA3-202ENST00000348639 HBE1P02100 147 aa16.77■□□□□ 0.28
CHRNA3-202ENST00000348639 SAA2P0DJI9 122 aaPredicted RBP16.77■□□□□ 0.28
CHRNA3-202ENST00000348639 TMEM88Q6PEY1 159 aa16.77■□□□□ 0.28
CHRNA3-202ENST00000348639 LINC01560Q8TB33 94 aa16.77■□□□□ 0.28
CHRNA3-202ENST00000348639 SFT2D1Q8WV19 159 aa16.77■□□□□ 0.28
CHRNA3-202ENST00000348639 SLC35B3Q9H1N7 401 aa16.77■□□□□ 0.28
CHRNA3-202ENST00000348639 SLC25A10Q9UBX3 287 aaPredicted RBP16.77■□□□□ 0.28
CHRNA3-202ENST00000348639 ATRXP46100 2492 aa16.77■□□□□ 0.28
CHRNA3-202ENST00000348639 PPIAL4EA0A075B759 164 aa16.77■□□□□ 0.27
CHRNA3-202ENST00000348639 TRAV1-1A0A0B4J248 108 aa16.77■□□□□ 0.27
CHRNA3-202ENST00000348639 PPIAL4DF5H284 164 aa16.77■□□□□ 0.27
CHRNA3-202ENST00000348639 PPIAL4FP0DN26 164 aa16.77■□□□□ 0.27
CHRNA3-202ENST00000348639 NQO2P16083 231 aa16.77■□□□□ 0.27
CHRNA3-202ENST00000348639 NDUFB7P17568 137 aa16.77■□□□□ 0.27
CHRNA3-202ENST00000348639 ERVK-16P61578 105 aa16.77■□□□□ 0.27
CHRNA3-202ENST00000348639 PRAMEF5Q5TYX0 476 aa16.77■□□□□ 0.27
CHRNA3-202ENST00000348639 OR4S2Q8NH73 311 aa16.77■□□□□ 0.27
CHRNA3-202ENST00000348639 TAF15Q92804 592 aaKnown RBP eCLIP16.77■□□□□ 0.27
CHRNA3-202ENST00000348639 ZNF251Q9BRH9 671 aa16.77■□□□□ 0.27
CHRNA3-202ENST00000348639 RPUSD1Q9UJJ7 312 aaKnown RBP16.77■□□□□ 0.27
CHRNA3-202ENST00000348639 PPIAL4AQ9Y536 164 aa16.77■□□□□ 0.27
CHRNA3-202ENST00000348639 NCOR2Q9Y618 2525 aa16.76■□□□□ 0.27
CHRNA3-202ENST00000348639 PKDREJQ9NTG1 2253 aa16.76■□□□□ 0.27
CHRNA3-202ENST00000348639 RBFOX3A6NFN3 312 aa16.76■□□□□ 0.27
CHRNA3-202ENST00000348639 LY86O95711 162 aa16.76■□□□□ 0.27
CHRNA3-202ENST00000348639 RAB2AP61019 212 aa16.76■□□□□ 0.27
CHRNA3-202ENST00000348639 MEF2CQ06413 473 aaPredicted RBP16.76■□□□□ 0.27
CHRNA3-202ENST00000348639 KDF1Q8NAX2 398 aaPredicted RBP16.76■□□□□ 0.27
CHRNA3-202ENST00000348639 OR10P1Q8NGE3 313 aa16.76■□□□□ 0.27
CHRNA3-202ENST00000348639 CCL17Q92583 94 aa16.76■□□□□ 0.27
CHRNA3-202ENST00000348639 PINX1Q96BK5 328 aaKnown RBP16.76■□□□□ 0.27
CHRNA3-202ENST00000348639 DYNLRB1Q9NP97 96 aa16.76■□□□□ 0.27
CHRNA3-202ENST00000348639 RPRMQ9NS64 109 aa16.76■□□□□ 0.27
CHRNA3-202ENST00000348639 TMEM106BQ9NUM4 274 aa16.76■□□□□ 0.27
CHRNA3-202ENST00000348639 CHD8Q9HCK8 2581 aa16.76■□□□□ 0.27
CHRNA3-202ENST00000348639 UBE2L5PA0A1B0GUS4 154 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 GRNP28799 593 aaKnown RBP16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 CHRNB4P30926 498 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 THBS3P49746 956 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 MRPS11P82912 194 aaKnown RBP16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 FBXL19-AS1Q494R0 122 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 SSX9Q7RTT3 188 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 CBLN2Q8IUK8 224 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 OR4A16Q8NH70 328 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 RBMXL1Q96E39 390 aaKnown RBP16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 ADTRPQ96IZ2 230 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 RARRES2Q99969 163 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 TMEM147Q9BVK8 224 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 MS4A5Q9H3V2 200 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 MMP23AO75900 390 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 OR2B8PP59922 312 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms