RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 SLC39A9Q9NUM3 307 aa17.81■□□□□ 0.44
PTPN18-202ENST00000347849 PSPNO60542 156 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 AMBPP02760 352 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 KITLGP21583 273 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 HBG1P69891 147 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 HBG2P69892 147 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 TBR1Q16650 682 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 TMEM241Q24JQ0 296 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 RIMS4Q9H426 269 aaPredicted RBP17.8■□□□□ 0.44
PTPN18-202ENST00000347849 NAT8Q9UHE5 227 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 IFNA1P01562 189 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 IGKV1-5P01602 117 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 PFN1P07737 140 aaKnown RBP17.8■□□□□ 0.44
PTPN18-202ENST00000347849 CEACAM8P31997 349 aaPredicted RBP17.8■□□□□ 0.44
PTPN18-202ENST00000347849 TDGF1P3P51864 188 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 ZNF146Q15072 292 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 ZNF718Q3SXZ3 478 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 OR10V1Q8NGI7 309 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 RPUSD4Q96CM3 377 aaKnown RBP17.8■□□□□ 0.44
PTPN18-202ENST00000347849 WDR61Q9GZS3 305 aaKnown RBP17.8■□□□□ 0.44
PTPN18-202ENST00000347849 SH3BGRL2Q9UJC5 107 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 LAMP3Q9UQV4 416 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 RELNP78509 3460 aa17.8■□□□□ 0.44
PTPN18-202ENST00000347849 SLC31A2O15432 143 aa17.79■□□□□ 0.44
PTPN18-202ENST00000347849 KRTCAP3Q53RY4 240 aa17.79■□□□□ 0.44
PTPN18-202ENST00000347849 SPRNQ5BIV9 151 aa17.79■□□□□ 0.44
PTPN18-202ENST00000347849 DOLPP1Q86YN1 238 aa17.79■□□□□ 0.44
PTPN18-202ENST00000347849 DUSP13Q9UII6 198 aa17.79■□□□□ 0.44
PTPN18-202ENST00000347849 RBM7Q9Y580 266 aaKnown RBP17.79■□□□□ 0.44
PTPN18-202ENST00000347849 GZMHP20718 246 aa17.79■□□□□ 0.44
PTPN18-202ENST00000347849 GCH1P30793 250 aa17.79■□□□□ 0.44
PTPN18-202ENST00000347849 TESK1Q15569 626 aa17.79■□□□□ 0.44
PTPN18-202ENST00000347849 RPP25LQ8N5L8 163 aaKnown RBP17.79■□□□□ 0.44
PTPN18-202ENST00000347849 OR1P1Q8NH06 330 aa17.79■□□□□ 0.44
PTPN18-202ENST00000347849 KIAA2026Q5HYC2 2103 aa17.79■□□□□ 0.44
PTPN18-202ENST00000347849 TRBV6-6A0A0A6YYG2 114 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 DVL1O14640 695 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 IGLV2-14P01704 120 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 NHLH1Q02575 133 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 TIMM23BQ5SRD1 257 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 WDR82Q6UXN9 313 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 Q8IYB0 196 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 LSM10Q969L4 123 aaKnown RBP17.78■□□□□ 0.44
PTPN18-202ENST00000347849 MISP3Q96FF7 219 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 HES4Q9HCC6 221 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 ZGRF1Q86YA3 2104 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 PTPRQQ9UMZ3 2332 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 UBE2L5PA0A1B0GUS4 154 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 XKRY2A2RUG3 117 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 TMEM210A6NLX4 147 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 IGKV1D-33P01593 117 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 IGKV1-33P01594 117 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 MEF2BQ02080 365 aaPredicted RBP17.78■□□□□ 0.44
PTPN18-202ENST00000347849 BSXQ3C1V8 233 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 MBNL2Q5VZF2 373 aaKnown RBP17.78■□□□□ 0.44
PTPN18-202ENST00000347849 OR8G2PQ6IF36 304 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 ZNF497Q6ZNH5 498 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 PINX1Q96BK5 328 aaKnown RBP17.78■□□□□ 0.44
PTPN18-202ENST00000347849 CXXC4Q9H2H0 198 aa17.78■□□□□ 0.44
PTPN18-202ENST00000347849 ZNF705GA8MUZ8 300 aaPredicted RBP17.77■□□□□ 0.44
PTPN18-202ENST00000347849 HAND1O96004 215 aa17.77■□□□□ 0.44
PTPN18-202ENST00000347849 TAS2R60P59551 318 aa17.77■□□□□ 0.44
PTPN18-202ENST00000347849 VHLLQ6RSH7 139 aa17.77■□□□□ 0.44
PTPN18-202ENST00000347849 ZNF66Q6ZN08 573 aa17.77■□□□□ 0.44
PTPN18-202ENST00000347849 ZNF664Q8N3J9 261 aa17.77■□□□□ 0.44
PTPN18-202ENST00000347849 TAF15Q92804 592 aaKnown RBP eCLIP17.77■□□□□ 0.44
PTPN18-202ENST00000347849 METRNQ9UJH8 293 aa17.77■□□□□ 0.44
PTPN18-202ENST00000347849 IGF2RP11717 2491 aa17.77■□□□□ 0.44
PTPN18-202ENST00000347849 KALRNO60229 2985 aa17.77■□□□□ 0.44
PTPN18-202ENST00000347849 SELLP14151 372 aa17.77■□□□□ 0.43
PTPN18-202ENST00000347849 FGF7P21781 194 aa17.77■□□□□ 0.43
PTPN18-202ENST00000347849 GALR1P47211 349 aa17.77■□□□□ 0.43
PTPN18-202ENST00000347849 FAM53AQ6NSI3 398 aaPredicted RBP17.77■□□□□ 0.43
PTPN18-202ENST00000347849 CYP2G1PQ6ZSU1 146 aa17.77■□□□□ 0.43
PTPN18-202ENST00000347849 OR51G1Q8NGK1 321 aa17.77■□□□□ 0.43
PTPN18-202ENST00000347849 PIGBOS1A0A0B4J2F0 54 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 A8MXE2 369 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 PPP5D1E7EU14 171 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 K7ENP7 123 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 RPL23P62829 140 aaKnown RBP17.76■□□□□ 0.43
PTPN18-202ENST00000347849 ZNF585BQ52M93 769 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 PCGF1Q9BSM1 259 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 KCNS2Q9ULS6 477 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 A0A0G2JNJ9 132 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 C1QTNF9BB2RNN3 333 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 SH2D1BO14796 132 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 FAM87AP0C7U9 286 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 Q3ZCU0 254 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 FAM169BQ8N8A8 192 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 OR2Z1Q8NG97 314 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 RNASEH2CQ8TDP1 164 aaKnown RBP17.76■□□□□ 0.43
PTPN18-202ENST00000347849 PYGO2Q9BRQ0 406 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 ELOVL1Q9BW60 279 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 SFXN3Q9BWM7 321 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 Q9UFV3 132 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 TRAPPC2LQ9UL33 140 aa17.76■□□□□ 0.43
PTPN18-202ENST00000347849 TLN1Q9Y490 2541 aaKnown RBP17.76■□□□□ 0.43
PTPN18-202ENST00000347849 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.75■□□□□ 0.43
PTPN18-202ENST00000347849 A8MWP6 167 aa17.75■□□□□ 0.43
PTPN18-202ENST00000347849 H7BYZ3 331 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms