RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 IGKV1-16P04430 117 aa15.26■□□□□ 0.03
CHMP4A-201ENST00000347519 LPAR6P43657 344 aa15.26■□□□□ 0.03
CHMP4A-201ENST00000347519 BPIFB3P59826 476 aa15.26■□□□□ 0.03
CHMP4A-201ENST00000347519 CBX3Q13185 183 aa15.26■□□□□ 0.03
CHMP4A-201ENST00000347519 TMEM222Q9H0R3 208 aa15.26■□□□□ 0.03
CHMP4A-201ENST00000347519 TMEM160Q9NX00 188 aa15.26■□□□□ 0.03
CHMP4A-201ENST00000347519 KCNIP3Q9Y2W7 256 aa15.26■□□□□ 0.03
CHMP4A-201ENST00000347519 S1PR2O95136 353 aa15.25■□□□□ 0.03
CHMP4A-201ENST00000347519 VENTXO95231 258 aa15.25■□□□□ 0.03
CHMP4A-201ENST00000347519 CRYZL1O95825 349 aa15.25■□□□□ 0.03
CHMP4A-201ENST00000347519 CCDC144NLQ6NUI1 221 aa15.25■□□□□ 0.03
CHMP4A-201ENST00000347519 LIAT1Q6ZQX7 453 aa15.25■□□□□ 0.03
CHMP4A-201ENST00000347519 SELENOHQ8IZQ5 122 aaKnown RBP15.25■□□□□ 0.03
CHMP4A-201ENST00000347519 PIFOQ8TCI5 191 aa15.25■□□□□ 0.03
CHMP4A-201ENST00000347519 PRELID3BQ9Y3B1 194 aa15.25■□□□□ 0.03
CHMP4A-201ENST00000347519 WASHC3Q9Y3C0 194 aa15.25■□□□□ 0.03
CHMP4A-201ENST00000347519 FAM96BQ9Y3D0 163 aa15.25■□□□□ 0.03
CHMP4A-201ENST00000347519 NF1P21359 2839 aa15.25■□□□□ 0.03
CHMP4A-201ENST00000347519 FAM90A9PA6NNJ1 464 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 H7C2Y5 167 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 DUS4LO95620 317 aaKnown RBP15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 APOA2P02652 100 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 SNRNP70P08621 437 aaKnown RBP15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 SRP14P37108 136 aaKnown RBP15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 C2orf68Q2NKX9 166 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 MITD1Q8WV92 249 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 OR51J1Q9H342 316 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 SRRM4A7MD48 611 aaKnown RBP15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 SNRPGP15A8MWD9 76 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 RBFOX2O43251 390 aaKnown RBP eCLIP15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 CDS2O95674 445 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 IGKV1D-33P01593 117 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 IGKV1-33P01594 117 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 FBP1P09467 338 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 RPA2P15927 270 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 CD1BP29016 333 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 KIR2DS2P43631 304 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 TUSC1Q2TAM9 212 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 PDPNQ86YL7 162 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 TCTEX1D1Q8N7M0 179 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 OR4S2Q8NH73 311 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 TMEM56Q96MV1 263 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 GPN1Q9HCN4 374 aaPredicted RBP15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 TMEM56-RWDD3S4R434 201 aa15.24■□□□□ 0.03
CHMP4A-201ENST00000347519 hCG_2014768A0A024R1R8 64 aa15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 CREBL2O60519 120 aaPredicted RBP15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 SERPINE2P07093 398 aa15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 ANXA3P12429 323 aa15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 CNTFRP26992 372 aa15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 MC5RP33032 325 aa15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 HNF4GQ14541 408 aa15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 RTL8BQ17RB0 113 aa15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 TMEM177Q53S58 311 aa15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 TMEM268Q5VZI3 342 aa15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 C12orf45Q8N5I9 185 aaPredicted RBP15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 TEX29Q8N6K0 151 aa15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 EAF1Q96JC9 268 aaPredicted RBP15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 SSX3Q99909 188 aa15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 FAM212BQ9NTI7 297 aaPredicted RBP15.23■□□□□ 0.03
CHMP4A-201ENST00000347519 MXRA5Q9NR99 2828 aa15.22■□□□□ 0.03
CHMP4A-201ENST00000347519 A0A0G2JRQ6 117 aa15.22■□□□□ 0.03
CHMP4A-201ENST00000347519 VGLL3A8MV65 326 aa15.22■□□□□ 0.03
CHMP4A-201ENST00000347519 INAFM1C9JVW0 142 aa15.22■□□□□ 0.03
CHMP4A-201ENST00000347519 B3GALNT1O75752 331 aa15.22■□□□□ 0.03
CHMP4A-201ENST00000347519 IGKV1-5P01602 117 aa15.22■□□□□ 0.03
CHMP4A-201ENST00000347519 RRASP10301 218 aa15.22■□□□□ 0.03
CHMP4A-201ENST00000347519 TAGLNQ01995 201 aaKnown RBP15.22■□□□□ 0.03
CHMP4A-201ENST00000347519 C11orf88Q6PI97 169 aa15.22■□□□□ 0.03
CHMP4A-201ENST00000347519 LYZL2Q7Z4W2 148 aa15.22■□□□□ 0.03
CHMP4A-201ENST00000347519 VKORC1L1Q8N0U8 176 aa15.22■□□□□ 0.03
CHMP4A-201ENST00000347519 UXS1Q8NBZ7 420 aa15.22■□□□□ 0.03
CHMP4A-201ENST00000347519 A0A0B4J2A0 478 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 DBX1A6NMT0 343 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 ADAP1O75689 374 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 HPRT1P00492 218 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 IGLV2-23P01705 113 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 HNF1AP20823 631 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 G6PCP35575 357 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 DYNLT3P51808 116 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 EBI3Q14213 229 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 IZUMO4Q1ZYL8 232 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 LRRC75BQ2VPJ9 315 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 KRTAP21-3Q3LHN1 58 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 DHRS7BQ6IAN0 325 aaPredicted RBP15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 ZNF695Q8IW36 515 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 LGI3Q8N145 548 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 Q8N6K4 173 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 SLC35G3Q8N808 338 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 LRTM2Q8N967 370 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 COQ8AQ8NI60 647 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 CD300LFQ8TDQ1 290 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 FLYWCH2Q96CP2 140 aaKnown RBP15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 SEC22AQ96IW7 307 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 PLEKHA2Q9HB19 425 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 SHPKQ9UHJ6 478 aa15.21■□□□□ 0.02
CHMP4A-201ENST00000347519 H3BUX3 64 aa15.2■□□□□ 0.02
CHMP4A-201ENST00000347519 SHOXO15266 292 aa15.2■□□□□ 0.02
CHMP4A-201ENST00000347519 HOXB5P09067 269 aa15.2■□□□□ 0.02
CHMP4A-201ENST00000347519 BRS3P32247 399 aa15.2■□□□□ 0.02
CHMP4A-201ENST00000347519 F2RL1P55085 397 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms