RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 QSER1Q2KHR3 1735 aa19.79■□□□□ 0.76
NPAS3-201ENST00000346562 LHFPL5Q8TAF8 219 aa19.79■□□□□ 0.76
NPAS3-201ENST00000346562 GEMIN7Q9H840 131 aaKnown RBP19.79■□□□□ 0.76
NPAS3-201ENST00000346562 IGHMP01871 453 aa19.79■□□□□ 0.76
NPAS3-201ENST00000346562 MEF2BQ02080 365 aaPredicted RBP19.79■□□□□ 0.76
NPAS3-201ENST00000346562 TMEM101Q96IK0 257 aa19.79■□□□□ 0.76
NPAS3-201ENST00000346562 KIR2DL4Q99706 377 aa19.79■□□□□ 0.76
NPAS3-201ENST00000346562 TMEM70Q9BUB7 260 aa19.79■□□□□ 0.76
NPAS3-201ENST00000346562 TNFRSF9Q07011 255 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 ALKBH7Q9BT30 221 aaPredicted RBP19.78■□□□□ 0.76
NPAS3-201ENST00000346562 FOXJ2Q9P0K8 574 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 LOC101059948A0A1B0GTJ6 334 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 VSIG10L2P0DP72 767 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 ZNF79Q15937 498 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 SPRED2Q7Z698 418 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 LINC01560Q8TB33 94 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 SGK494Q96LW2 274 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 SIRT4Q9Y6E7 314 aaPredicted RBP19.78■□□□□ 0.76
NPAS3-201ENST00000346562 COL18A1P39060 1754 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 LOC107984156A0A0G2JMH3 177 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 TCF24Q7RTU0 167 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 ARL17AQ8IVW1 177 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 FCARP24071 287 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 FAM74A4Q5TZK3 123 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 SRSF12Q8WXF0 261 aaKnown RBP19.78■□□□□ 0.76
NPAS3-201ENST00000346562 HIST1H4GQ99525 98 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 WNT5BQ9H1J7 359 aa19.78■□□□□ 0.76
NPAS3-201ENST00000346562 PRRC2BQ5JSZ5 2229 aaKnown RBP19.78■□□□□ 0.76
NPAS3-201ENST00000346562 IGKV3OR2-268A0A0C4DH90 116 aa19.77■□□□□ 0.76
NPAS3-201ENST00000346562 C1orf100Q5SVJ3 147 aa19.77■□□□□ 0.76
NPAS3-201ENST00000346562 ABLIM2Q6H8Q1 611 aa19.77■□□□□ 0.76
NPAS3-201ENST00000346562 GPR61Q9BZJ8 451 aa19.77■□□□□ 0.76
NPAS3-201ENST00000346562 TRGV3P03979 118 aa19.77■□□□□ 0.76
NPAS3-201ENST00000346562 LAMB2P55268 1798 aa19.77■□□□□ 0.76
NPAS3-201ENST00000346562 FABP2P12104 132 aa19.77■□□□□ 0.75
NPAS3-201ENST00000346562 HIST1H1AQ02539 215 aaPredicted RBP19.77■□□□□ 0.75
NPAS3-201ENST00000346562 CSRP2Q16527 193 aa19.77■□□□□ 0.75
NPAS3-201ENST00000346562 RSPO4Q2I0M5 234 aaPredicted RBP19.77■□□□□ 0.75
NPAS3-201ENST00000346562 NEU4Q8WWR8 484 aaPredicted RBP19.77■□□□□ 0.75
NPAS3-201ENST00000346562 GON4LQ3T8J9 2241 aa19.76■□□□□ 0.75
NPAS3-201ENST00000346562 LEAP2Q969E1 77 aa19.76■□□□□ 0.75
NPAS3-201ENST00000346562 ARL14EPLP0DKL9 152 aa19.76■□□□□ 0.75
NPAS3-201ENST00000346562 ATP5IP56385 69 aaPredicted RBP19.76■□□□□ 0.75
NPAS3-201ENST00000346562 PRSS2P07478 247 aa19.76■□□□□ 0.75
NPAS3-201ENST00000346562 HKR1P10072 659 aa19.76■□□□□ 0.75
NPAS3-201ENST00000346562 JOSD1Q15040 202 aaPredicted RBP19.76■□□□□ 0.75
NPAS3-201ENST00000346562 PMCHL1Q16048 86 aa19.76■□□□□ 0.75
NPAS3-201ENST00000346562 SSBP3Q9BWW4 388 aaPredicted RBP19.76■□□□□ 0.75
NPAS3-201ENST00000346562 A0A1W2PP11 408 aa19.75■□□□□ 0.75
NPAS3-201ENST00000346562 MUC1P15941 1255 aaPredicted RBP19.75■□□□□ 0.75
NPAS3-201ENST00000346562 ZG16O60844 167 aa19.75■□□□□ 0.75
NPAS3-201ENST00000346562 SPATA45Q537H7 98 aa19.75■□□□□ 0.75
NPAS3-201ENST00000346562 HSPB9Q9BQS6 159 aa19.75■□□□□ 0.75
NPAS3-201ENST00000346562 LEPROTL1O95214 131 aa19.75■□□□□ 0.75
NPAS3-201ENST00000346562 Q6ZT83 130 aa19.75■□□□□ 0.75
NPAS3-201ENST00000346562 SPSB4Q96A44 273 aa19.75■□□□□ 0.75
NPAS3-201ENST00000346562 NUP205Q92621 2012 aa19.75■□□□□ 0.75
NPAS3-201ENST00000346562 WISP3O95389 354 aaPredicted RBP19.75■□□□□ 0.75
NPAS3-201ENST00000346562 GLIPR1P48060 266 aa19.75■□□□□ 0.75
NPAS3-201ENST00000346562 LINC00470Q9BZP3 86 aa19.75■□□□□ 0.75
NPAS3-201ENST00000346562 SHANK3Q9BYB0 1731 aa19.74■□□□□ 0.75
NPAS3-201ENST00000346562 MARF1Q9Y4F3 1742 aaKnown RBP19.74■□□□□ 0.75
NPAS3-201ENST00000346562 ARL6IP6Q8N6S5 226 aa19.74■□□□□ 0.75
NPAS3-201ENST00000346562 OR5P3Q8WZ94 311 aa19.74■□□□□ 0.75
NPAS3-201ENST00000346562 AMELYQ99218 206 aa19.74■□□□□ 0.75
NPAS3-201ENST00000346562 H7C1H1 209 aa19.74■□□□□ 0.75
NPAS3-201ENST00000346562 MRPL18Q9H0U6 180 aaKnown RBP19.74■□□□□ 0.75
NPAS3-201ENST00000346562 GP6Q9HCN6 339 aa19.74■□□□□ 0.75
NPAS3-201ENST00000346562 TCF19Q9Y242 345 aa19.74■□□□□ 0.75
NPAS3-201ENST00000346562 A0A1W2PQM1 296 aa19.74■□□□□ 0.75
NPAS3-201ENST00000346562 TIMM23BQ5SRD1 257 aa19.74■□□□□ 0.75
NPAS3-201ENST00000346562 RTN4RL2Q86UN3 420 aa19.74■□□□□ 0.75
NPAS3-201ENST00000346562 TRBV5-7A0A0A0MS05 114 aa19.74■□□□□ 0.75
NPAS3-201ENST00000346562 Q96M66 194 aa19.74■□□□□ 0.75
NPAS3-201ENST00000346562 NRIP2Q9BQI9 281 aa19.74■□□□□ 0.75
NPAS3-201ENST00000346562 CEACAM4O75871 244 aa19.73■□□□□ 0.75
NPAS3-201ENST00000346562 P2RY4P51582 365 aa19.73■□□□□ 0.75
NPAS3-201ENST00000346562 MESP2Q0VG99 397 aa19.73■□□□□ 0.75
NPAS3-201ENST00000346562 OR4X2Q8NGF9 303 aa19.73■□□□□ 0.75
NPAS3-201ENST00000346562 ACSF3Q4G176 576 aaPredicted RBP19.73■□□□□ 0.75
NPAS3-201ENST00000346562 FUT5Q11128 374 aa19.73■□□□□ 0.75
NPAS3-201ENST00000346562 OR4A47Q6IF82 309 aa19.73■□□□□ 0.75
NPAS3-201ENST00000346562 SMIM8Q96KF7 97 aa19.73■□□□□ 0.75
NPAS3-201ENST00000346562 A0A0G2JLM5 398 aa19.73■□□□□ 0.75
NPAS3-201ENST00000346562 RECKO95980 971 aa19.73■□□□□ 0.75
NPAS3-201ENST00000346562 IL4P05112 153 aa19.73■□□□□ 0.75
NPAS3-201ENST00000346562 SAPCD1Q5SSQ6 148 aa19.73■□□□□ 0.75
NPAS3-201ENST00000346562 C7orf66A4D0T2 115 aa19.72■□□□□ 0.75
NPAS3-201ENST00000346562 LMX1BO60663 402 aa19.72■□□□□ 0.75
NPAS3-201ENST00000346562 COL5A1-AS1Q5SY13 56 aa19.72■□□□□ 0.75
NPAS3-201ENST00000346562 TMEM106BQ9NUM4 274 aa19.72■□□□□ 0.75
NPAS3-201ENST00000346562 RPS11P62280 158 aaKnown RBP eCLIP19.72■□□□□ 0.75
NPAS3-201ENST00000346562 C10orf128Q5T292 105 aa19.72■□□□□ 0.75
NPAS3-201ENST00000346562 OR10AG1Q8NH19 301 aa19.72■□□□□ 0.75
NPAS3-201ENST00000346562 NEU1Q99519 415 aa19.71■□□□□ 0.75
NPAS3-201ENST00000346562 EPOPA6NHQ4 379 aa19.71■□□□□ 0.75
NPAS3-201ENST00000346562 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.71■□□□□ 0.75
NPAS3-201ENST00000346562 SUMO2P61956 95 aaKnown RBP19.71■□□□□ 0.75
NPAS3-201ENST00000346562 SMUG1Q53HV7 270 aa19.71■□□□□ 0.75
NPAS3-201ENST00000346562 SCARF2Q96GP6 870 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms