RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 H2BFWTQ7Z2G1 175 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 TCTEX1D1Q8N7M0 179 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 OR10A7Q8NGE5 316 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 QTRT1Q9BXR0 403 aaKnown RBP11.06□□□□□ -0.64
CDC42-202ENST00000344548 MRPL20Q9BYC9 149 aaKnown RBP11.06□□□□□ -0.64
CDC42-202ENST00000344548 RBKSQ9H477 322 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 CHODLQ9H9P2 273 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 BARX1Q9HBU1 254 aaPredicted RBP11.06□□□□□ -0.64
CDC42-202ENST00000344548 FAM212BQ9NTI7 297 aaPredicted RBP11.06□□□□□ -0.64
CDC42-202ENST00000344548 COA4Q9NYJ1 87 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 CHD6Q8TD26 2715 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 PPIAL4CA0A0B4J2A2 164 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 ANKRD34BA5PLL1 514 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 TXNL1O43396 289 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 F12P00748 615 aaPredicted RBP11.06□□□□□ -0.64
CDC42-202ENST00000344548 PPIAL4GP0DN37 164 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 UBE2KP61086 200 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 ZNF833PQ6ZTB9 187 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 HAPLN4Q86UW8 402 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.06□□□□□ -0.64
CDC42-202ENST00000344548 FAM216AQ8WUB2 273 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 PHYHIPLQ96FC7 376 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 NEIL1Q96FI4 390 aaPredicted RBP11.06□□□□□ -0.64
CDC42-202ENST00000344548 SH3BGRL3Q9H299 93 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 HSPB7Q9UBY9 170 aa11.06□□□□□ -0.64
CDC42-202ENST00000344548 FBN2P35556 2912 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 MAP1AP78559 2803 aaPredicted RBP11.05□□□□□ -0.64
CDC42-202ENST00000344548 TAAR5O14804 337 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 RRASP10301 218 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 MYOD1P15172 320 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 PVALBP20472 110 aaPredicted RBP11.05□□□□□ -0.64
CDC42-202ENST00000344548 DYNLT3P51808 116 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 RPS16P62249 146 aaKnown RBP11.05□□□□□ -0.64
CDC42-202ENST00000344548 COMMD7Q86VX2 200 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 ABHD12Q8N2K0 398 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 ZNF525Q8N782 197 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 OR8B3Q8NGG8 313 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 OR5C1Q8NGR4 320 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 CD300LFQ8TDQ1 290 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 RAB1CQ92928 201 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 ST6GALNAC6Q969X2 333 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 OR8B2Q96RD0 313 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 REG4Q9BYZ8 158 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 LPAR3Q9UBY5 353 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 A0A087X0M5 115 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 TRBV23-1A0A0A0MS06 115 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 A0A1B0GX30 115 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 OVOL3O00110 214 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 RBFOX2O43251 390 aaKnown RBP eCLIP11.05□□□□□ -0.644e-8■■□□□ 13.9
CDC42-202ENST00000344548 METTL15P1P0C7V9 234 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 TMEM30BQ3MIR4 351 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 PATZ1Q9HBE1 687 aaKnown RBP11.05□□□□□ -0.64
CDC42-202ENST00000344548 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.05□□□□□ -0.64
CDC42-202ENST00000344548 MIOXQ9UGB7 285 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 ITGB1BP2Q9UKP3 347 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 PRELID3BQ9Y3B1 194 aa11.05□□□□□ -0.64
CDC42-202ENST00000344548 CELSR2Q9HCU4 2923 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 GAPDHP04406 335 aaKnown RBP11.04□□□□□ -0.64
CDC42-202ENST00000344548 THBS3P49746 956 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 Q8N7P7 452 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 UBAC2Q8NBM4 344 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 ZNF596Q8TC21 504 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 IGFBPL1Q8WX77 278 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 RAB40CQ96S21 281 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 ARV1Q9H2C2 271 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 TMEM133Q9H2Q1 129 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 TMEM140Q9NV12 185 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 PSENENQ9NZ42 101 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 WSB1Q9Y6I7 421 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 WNK2Q9Y3S1 2297 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 RBMXL2O75526 392 aaKnown RBP11.04□□□□□ -0.64
CDC42-202ENST00000344548 JTBO76095 146 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 MMP9P14780 707 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 ZFP36P26651 326 aaKnown RBP11.04□□□□□ -0.64
CDC42-202ENST00000344548 RELBQ01201 579 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 SPANXN5Q5MJ07 72 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 LDLRAD2Q5SZI1 272 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 PDZD9Q8IXQ8 264 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 HSD17B11Q8NBQ5 300 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 LY6G5BQ8NDX9 201 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 TIMD4Q96H15 378 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 RHOVQ96L33 236 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 SLC25A32Q9H2D1 315 aa11.04□□□□□ -0.64
CDC42-202ENST00000344548 CENPEQ02224 2701 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 IGHV2-26A0A0B4J1V2 119 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 PIGBOS1A0A0B4J2F0 54 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 NQO2P16083 231 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 EFNA4P52798 201 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 ARF6P62330 175 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 GNB2P62879 340 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 OR4A47Q6IF82 309 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 OR10X1Q8NGY0 326 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 OR4S2Q8NH73 311 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 C8orf46Q8TAG6 207 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 NRGNQ92686 78 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 RITA1Q96K30 269 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 SMIM8Q96KF7 97 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 OR4C12Q96R67 309 aa11.03□□□□□ -0.64
CDC42-202ENST00000344548 H0YJW9 148 aa11.02□□□□□ -0.64
CDC42-202ENST00000344548 FGF16O43320 207 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms