RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 MRPL18Q9H0U6 180 aaKnown RBP7.35□□□□□ -1.23
FGD6-201ENST00000343958 LOC285556D6RIA3 1793 aa7.35□□□□□ -1.23
FGD6-201ENST00000343958 C9orf172C9J069 976 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 KRTCAP3Q53RY4 240 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 IBA57Q5T440 356 aaKnown RBP7.34□□□□□ -1.23
FGD6-201ENST00000343958 FAM216BQ8N7L0 139 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 TMEM116Q8NCL8 245 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 OR8A1Q8NGG7 326 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 RGPD3A6NKT7 1758 aaPredicted RBP7.34□□□□□ -1.23
FGD6-201ENST00000343958 LOC102723996A0A087X1L8 192 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 DIRC3C9JPN6 131 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 ATP5G3P48201 142 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 SLC35E4Q6ICL7 350 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 PCSK4Q6UW60 755 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 BRWD3Q6RI45 1802 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 PRB3Q04118 309 aaPredicted RBP7.34□□□□□ -1.23
FGD6-201ENST00000343958 Q1RN00 199 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 LRRC75BQ2VPJ9 315 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 C9orf106Q8NAJ2 232 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 PGLYRP4Q96LB8 373 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 SMDT1Q9H4I9 107 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 ZNF581Q9P0T4 197 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 TAF1LQ8IZX4 1826 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 GRIFINA4D1Z8 144 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 GRAMD2BQ96HH9 432 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 FAM90A26D6RGX4 464 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 GCHFRP30047 84 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 MFAP2P55001 183 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 CCL20P78556 96 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 PSG7Q13046 419 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 WBP1Q96G27 269 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 SSBP3Q9BWW4 388 aaPredicted RBP7.34□□□□□ -1.23
FGD6-201ENST00000343958 CLDN18P56856 261 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 NABP2Q9BQ15 211 aa7.34□□□□□ -1.23
FGD6-201ENST00000343958 IGHV3-23P01764 117 aa7.34□□□□□ -1.24
FGD6-201ENST00000343958 NPIPB3Q92617 1050 aa7.34□□□□□ -1.24
FGD6-201ENST00000343958 ZNF430Q9H8G1 570 aaPredicted RBP7.34□□□□□ -1.24
FGD6-201ENST00000343958 S4R3C0 116 aa7.34□□□□□ -1.24
FGD6-201ENST00000343958 PTPRFP10586 1907 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 IGHV3OR16-10A0A075B7F0 116 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 MOSP00540 346 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 HIST1H1EP10412 219 aaKnown RBP7.33□□□□□ -1.24
FGD6-201ENST00000343958 RPL8P62917 257 aaKnown RBP7.33□□□□□ -1.24
FGD6-201ENST00000343958 MUC15Q8N387 334 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 NUBP1P53384 320 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 FGF11Q92914 225 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 VSIRQ9H7M9 311 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 BET1LQ9NYM9 111 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 ATAD5Q96QE3 1844 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 CGB1A6NKQ9 187 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 BRS3P32247 399 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 ELOBQ15370 118 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 TMEM97Q5BJF2 176 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 REPIN1Q9BWE0 567 aaKnown RBP7.33□□□□□ -1.24
FGD6-201ENST00000343958 RFNGQ9Y644 331 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 LOC102724200A0A096LPH7 203 aaPredicted RBP7.33□□□□□ -1.24
FGD6-201ENST00000343958 CCL1P22362 96 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 SSX8Q7RTT4 187 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 ZNF525Q8N782 197 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 LHX2P50458 406 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 RCC1LQ96I51 464 aaKnown RBP7.33□□□□□ -1.24
FGD6-201ENST00000343958 ZNF716A6NP11 495 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 GATA2P23769 480 aaPredicted RBP7.33□□□□□ -1.24
FGD6-201ENST00000343958 DIRC2Q96SL1 478 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 MAP1LC3CQ9BXW4 147 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 PQLC2LA1A4F0 135 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 IGFBP2P18065 325 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 ERVFRD-1P60508 538 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 FHL1Q13642 323 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 COX19Q49B96 90 aa7.33□□□□□ -1.24
FGD6-201ENST00000343958 ZNF729A6NN14 1252 aaPredicted RBP7.32□□□□□ -1.24
FGD6-201ENST00000343958 UCP1P25874 307 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 OTX1P32242 354 aaPredicted RBP7.32□□□□□ -1.24
FGD6-201ENST00000343958 ARF6P62330 175 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 WDR31Q8NA23 367 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 MYO18AQ92614 2054 aaKnown RBP7.32□□□□□ -1.24
FGD6-201ENST00000343958 OR2T8A6NH00 312 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 FAM209BQ5JX69 171 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 GALNT14Q96FL9 552 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 ZDHHC8Q9ULC8 765 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 TMEM189A5PLL7 270 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 C8orf88P0DMB2 117 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 HOXB1P14653 301 aaPredicted RBP7.32□□□□□ -1.24
FGD6-201ENST00000343958 HTN1P15515 57 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 TFPI2P48307 235 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 RELBQ01201 579 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 PPIAL4CA0A0B4J2A2 164 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 RPLP1P05386 114 aaKnown RBP7.32□□□□□ -1.24
FGD6-201ENST00000343958 PPIAL4GP0DN37 164 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 PPOXP50336 477 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 Q6ZT83 130 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 FAM89BQ8N5H3 189 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 CYTL1Q9NRR1 136 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 IFITM10A6NMD0 228 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 MPDU1O75352 247 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 AGAP20933 346 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 CRYGSP22914 178 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 CDX1P47902 265 aaPredicted RBP7.32□□□□□ -1.24
FGD6-201ENST00000343958 PNKDQ8N490 385 aa7.32□□□□□ -1.24
FGD6-201ENST00000343958 NABP1Q96AH0 204 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms