RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 IGLV3-19P01714 112 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 SRSF7Q16629 238 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNX18-202ENST00000343017 KRTAP27-1Q3LI81 207 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 WDR74Q6RFH5 385 aaPredicted RBP12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM19A2Q8N3H0 131 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 STRADBQ9C0K7 418 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM90A10PA6NDY2 464 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM90A18PA6NE21 464 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM90A16PA6NEW6 464 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM90A20PA6NIJ5 464 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM90A8PA6NJQ4 464 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM90A7PA6NKC0 464 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM90A22PA8MWA6 464 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM90A12PA8MX19 464 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM90A5PA8MXJ8 464 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM90A23PA8MXZ1 464 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 K7EN84 100 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 SCRG1O75711 98 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 GPX1P07203 203 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM90A15PP0C7V4 464 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM90A13PP0C7W8 464 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM90A14PP0C7W9 464 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 FAM90A24PP0C7X0 464 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 CD99P14209 185 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 CTRLP40313 264 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 CXCL12P48061 93 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 SAXO1Q8IYX7 474 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 APH1AQ96BI3 265 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 NRN1Q9NPD7 142 aa12.8□□□□□ -0.36
SNX18-202ENST00000343017 IGLV3-12A0A075B6K2 115 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 ODAMA1E959 279 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 C5orf49A4QMS7 147 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 LIFP15018 202 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 AMTP48728 403 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 HNRNPA3P51991 378 aaKnown RBP12.79□□□□□ -0.36
SNX18-202ENST00000343017 RPL30P62888 115 aaKnown RBP12.79□□□□□ -0.36
SNX18-202ENST00000343017 C1orf174Q8IYL3 243 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 TECTBQ96PL2 329 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 PRRG4Q9BZD6 226 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 BDP1A6H8Y1 2624 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 KNTC1P50748 2209 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 NKX6-3A6NJ46 265 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 CPT1CQ8TCG5 803 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 RRHO14718 337 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 PDE6DO43924 150 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 IGLC2P0DOY2 106 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 IGLC3P0DOY3 106 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 FOXG1P55316 489 aaPredicted RBP12.79□□□□□ -0.36
SNX18-202ENST00000343017 LCN12Q6JVE5 192 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 ST6GALNAC3Q8NDV1 305 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 CCDC74BQ96LY2 380 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 QTRT1Q9BXR0 403 aaKnown RBP12.79□□□□□ -0.36
SNX18-202ENST00000343017 SLC45A2Q9UMX9 530 aa12.79□□□□□ -0.36
SNX18-202ENST00000343017 A0A1W2PPV4 95 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 CLDN14O95500 239 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 ARL14EPLP0DKL9 152 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 CEACAM21Q3KPI0 293 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 ASPHD1Q5U4P2 390 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 AGBL5Q8NDL9 886 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 ABHD3Q8WU67 409 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 C1QTNF5Q9BXJ0 243 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 LIN7CQ9NUP9 197 aaKnown RBP12.78□□□□□ -0.36
SNX18-202ENST00000343017 HSPB7Q9UBY9 170 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 TRAPPC2LQ9UL33 140 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 RNF24Q9Y225 148 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 SIT1Q9Y3P8 196 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 A0A0G2JMM0 328 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 A0A1W2PPB8 328 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 A0A1W2PRS3 328 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 KIR3DP1A8MWS1 328 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 S1PR2O95136 353 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 NXPH1P58417 271 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 SAPCD1Q5SSQ6 148 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 MRPL21Q7Z2W9 205 aaKnown RBP12.78□□□□□ -0.36
SNX18-202ENST00000343017 MED12LQ86YW9 2145 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 OR8I2Q8N0Y5 310 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 Q8N7P7 452 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 OR4B1Q8NGF8 309 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 UHRF2Q96PU4 802 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 TP73-AS1Q9UF72 201 aa12.78□□□□□ -0.36
SNX18-202ENST00000343017 LOC105371242A0A075B767 164 aa12.77□□□□□ -0.36
SNX18-202ENST00000343017 CA6P23280 308 aa12.77□□□□□ -0.36
SNX18-202ENST00000343017 LPAL2Q16609 132 aa12.77□□□□□ -0.36
SNX18-202ENST00000343017 SLC25A45Q8N413 288 aa12.77□□□□□ -0.36
SNX18-202ENST00000343017 SPSB4Q96A44 273 aa12.77□□□□□ -0.36
SNX18-202ENST00000343017 RNF2Q99496 336 aa12.77□□□□□ -0.36
SNX18-202ENST00000343017 ZNF586Q9NXT0 402 aa12.77□□□□□ -0.36
SNX18-202ENST00000343017 ZNF391Q9UJN7 358 aa12.77□□□□□ -0.36
SNX18-202ENST00000343017 AHCTF1Q8WYP5 2266 aa12.77□□□□□ -0.37
SNX18-202ENST00000343017 ZNF716A6NP11 495 aa12.77□□□□□ -0.37
SNX18-202ENST00000343017 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.77□□□□□ -0.37
SNX18-202ENST00000343017 DEGS1O15121 323 aa12.77□□□□□ -0.37
SNX18-202ENST00000343017 ESDP10768 282 aa12.77□□□□□ -0.37
SNX18-202ENST00000343017 FKBP2P26885 142 aaKnown RBP12.77□□□□□ -0.37
SNX18-202ENST00000343017 TCL1AP56279 114 aa12.77□□□□□ -0.37
SNX18-202ENST00000343017 HOXA4Q00056 320 aaPredicted RBP12.77□□□□□ -0.37
SNX18-202ENST00000343017 UQCR10Q9UDW1 63 aa12.77□□□□□ -0.37
SNX18-202ENST00000343017 LRRC30A6NM36 301 aa12.77□□□□□ -0.37
SNX18-202ENST00000343017 DSCR4P56555 118 aaPredicted RBP12.77□□□□□ -0.37
SNX18-202ENST00000343017 FAM58AQ8N1B3 248 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms