RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 SAT2Q96F10 170 aaPredicted RBP16.39■□□□□ 0.21
RTN1-202ENST00000342503 ADTRPQ96IZ2 230 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 SH3BGRL3Q9H299 93 aa16.39■□□□□ 0.21
RTN1-202ENST00000342503 TPRP12270 2363 aaKnown RBP16.38■□□□□ 0.21
RTN1-202ENST00000342503 A8MXK9 166 aa16.38■□□□□ 0.21
RTN1-202ENST00000342503 SSX9Q7RTT3 188 aa16.38■□□□□ 0.21
RTN1-202ENST00000342503 NQO2P16083 231 aa16.37■□□□□ 0.21
RTN1-202ENST00000342503 ZNF841Q6ZN19 808 aa16.37■□□□□ 0.21
RTN1-202ENST00000342503 DTX2Q86UW9 622 aa16.37■□□□□ 0.21
RTN1-202ENST00000342503 NEU4Q8WWR8 484 aaPredicted RBP16.37■□□□□ 0.21
RTN1-202ENST00000342503 ATP5SQ99766 215 aa16.37■□□□□ 0.21
RTN1-202ENST00000342503 QTRT1Q9BXR0 403 aaKnown RBP16.37■□□□□ 0.21
RTN1-202ENST00000342503 RALYQ9UKM9 306 aaKnown RBP16.37■□□□□ 0.21
RTN1-202ENST00000342503 TRBV23-1A0A0A0MS06 115 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 FAM90A9PA6NNJ1 464 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 RBMXL2O75526 392 aaKnown RBP16.36■□□□□ 0.21
RTN1-202ENST00000342503 METTL15P1P0C7V9 234 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 ERVK-16P61578 105 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 SPANXN5Q5MJ07 72 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 VKORC1L1Q8N0U8 176 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 RAB39BQ96DA2 213 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 ABCA4P78363 2273 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 CRYZL1O95825 349 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 CT45A6P0DMU7 189 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 CT45A5P0DMU8 189 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 CT45A7P0DMV0 189 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 OR2B8PP59922 312 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 PXDC1Q5TGL8 231 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 ZNF833PQ6ZTB9 187 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 HAPLN4Q86UW8 402 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 MARC2Q969Z3 335 aa16.36■□□□□ 0.21
RTN1-202ENST00000342503 ATP6V0CP27449 155 aa16.35■□□□□ 0.21
RTN1-202ENST00000342503 BLOC1S1P78537 153 aa16.35■□□□□ 0.21
RTN1-202ENST00000342503 ARL16Q0P5N6 197 aa16.35■□□□□ 0.21
RTN1-202ENST00000342503 DTD1Q8TEA8 209 aa16.35■□□□□ 0.21
RTN1-202ENST00000342503 ZDHHC16Q969W1 377 aa16.35■□□□□ 0.21
RTN1-202ENST00000342503 LINC00052Q96N35 136 aa16.35■□□□□ 0.21
RTN1-202ENST00000342503 TMEM140Q9NV12 185 aa16.35■□□□□ 0.21
RTN1-202ENST00000342503 RFNGQ9Y644 331 aa16.35■□□□□ 0.21
RTN1-202ENST00000342503 HRNRQ86YZ3 2850 aaPredicted RBP16.35■□□□□ 0.21
RTN1-202ENST00000342503 DFFBO76075 338 aa16.34■□□□□ 0.21
RTN1-202ENST00000342503 ARHGDIBP52566 201 aa16.34■□□□□ 0.21
RTN1-202ENST00000342503 SPINK9Q5DT21 86 aa16.34■□□□□ 0.21
RTN1-202ENST00000342503 TMEM14EPQ6UXP3 125 aa16.34■□□□□ 0.21
RTN1-202ENST00000342503 OR4A16Q8NH70 328 aa16.34■□□□□ 0.21
RTN1-202ENST00000342503 RBMXL1Q96E39 390 aaKnown RBP16.34■□□□□ 0.21
RTN1-202ENST00000342503 DOCK11Q5JSL3 2073 aa16.34■□□□□ 0.21
RTN1-202ENST00000342503 TRAV3A0A0B4J244 114 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 CEBPZOSA8MTT3 80 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 J3QR06 171 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 PPIHO43447 177 aaKnown RBP16.33■□□□□ 0.21
RTN1-202ENST00000342503 IGHV1-8P0DP01 117 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 ZP3P21754 424 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 AARDQ4LEZ3 155 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 Q6ZRG5 221 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 C11orf42Q8N5U0 333 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 LINC00311Q8N616 119 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 C8orf31Q8N9H6 132 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 ZNF596Q8TC21 504 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 OR4C12Q96R67 309 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 HRH4Q9H3N8 390 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 UBTD1Q9HAC8 227 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 PARP11Q9NR21 331 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 MMP26Q9NRE1 261 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 CACFD1Q9UGQ2 172 aa16.33■□□□□ 0.21
RTN1-202ENST00000342503 LRBAP50851 2863 aa16.33■□□□□ 0.2
RTN1-202ENST00000342503 RAB19A4D1S5 217 aa16.33■□□□□ 0.2
RTN1-202ENST00000342503 RELBQ01201 579 aa16.33■□□□□ 0.2
RTN1-202ENST00000342503 TMEM182Q6ZP80 229 aaPredicted RBP16.33■□□□□ 0.2
RTN1-202ENST00000342503 STPG2Q8N412 459 aa16.33■□□□□ 0.2
RTN1-202ENST00000342503 OR8B3Q8NGG8 313 aa16.33■□□□□ 0.2
RTN1-202ENST00000342503 RAB1CQ92928 201 aa16.33■□□□□ 0.2
RTN1-202ENST00000342503 OR8B2Q96RD0 313 aa16.33■□□□□ 0.2
RTN1-202ENST00000342503 SLC35D1Q9NTN3 355 aa16.33■□□□□ 0.2
RTN1-202ENST00000342503 MIOXQ9UGB7 285 aa16.33■□□□□ 0.2
RTN1-202ENST00000342503 TET2Q6N021 2002 aaPredicted RBP16.32■□□□□ 0.2
RTN1-202ENST00000342503 A0A087X0M5 115 aa16.32■□□□□ 0.2
RTN1-202ENST00000342503 A0A1B0GX30 115 aa16.32■□□□□ 0.2
RTN1-202ENST00000342503 IGFBP2P18065 325 aa16.32■□□□□ 0.2
RTN1-202ENST00000342503 BTNL8Q6UX41 500 aa16.32■□□□□ 0.2
RTN1-202ENST00000342503 ZNF525Q8N782 197 aa16.32■□□□□ 0.2
RTN1-202ENST00000342503 OR10X1Q8NGY0 326 aa16.32■□□□□ 0.2
RTN1-202ENST00000342503 OR2G3Q8NGZ4 309 aa16.32■□□□□ 0.2
RTN1-202ENST00000342503 NEIL1Q96FI4 390 aaPredicted RBP16.32■□□□□ 0.2
RTN1-202ENST00000342503 TIMD4Q96H15 378 aa16.32■□□□□ 0.2
RTN1-202ENST00000342503 MRPL20Q9BYC9 149 aaKnown RBP16.32■□□□□ 0.2
RTN1-202ENST00000342503 NUDT19A8MXV4 375 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 GPR37O15354 613 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 IFNA17P01571 189 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 HBG1P69891 147 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 HBG2P69892 147 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 RUNX1Q01196 453 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 CIB3Q96Q77 187 aaPredicted RBP16.31■□□□□ 0.2
RTN1-202ENST00000342503 TSNAXQ99598 290 aaKnown RBP16.31■□□□□ 0.2
RTN1-202ENST00000342503 STRAPQ9Y3F4 350 aaKnown RBP16.31■□□□□ 0.2
RTN1-202ENST00000342503 KRBOX1C9JBD0 128 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 C1QL1O75973 258 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 IFNA5P01569 189 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 CDKN1AP38936 164 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 RTL8BQ17RB0 113 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms