RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 LIPFP07098 398 aa13.96□□□□□ -0.17
FRMD4A-202ENST00000342409 OR9G9P0C7N8 305 aa13.96□□□□□ -0.17
FRMD4A-202ENST00000342409 NUP62P37198 522 aaPredicted RBP13.96□□□□□ -0.17
FRMD4A-202ENST00000342409 HTR2BP41595 481 aa13.96□□□□□ -0.17
FRMD4A-202ENST00000342409 KIR2DS2P43631 304 aa13.96□□□□□ -0.17
FRMD4A-202ENST00000342409 ZNF137PP52743 207 aa13.96□□□□□ -0.17
FRMD4A-202ENST00000342409 SLC7A5P1Q8MH63 180 aa13.96□□□□□ -0.17
FRMD4A-202ENST00000342409 ZNF471Q9BX82 626 aaPredicted RBP13.96□□□□□ -0.17
FRMD4A-202ENST00000342409 BPESC1Q9GZL8 116 aa13.96□□□□□ -0.17
FRMD4A-202ENST00000342409 ANKRD17O75179 2603 aaKnown RBP13.96□□□□□ -0.17
FRMD4A-202ENST00000342409 LOC105371242A0A075B767 164 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 IGHV2-26A0A0B4J1V2 119 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 IGSF23A1L1A6 192 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 GPR137BO60478 399 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 MMP9P14780 707 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 LMO4P61968 165 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 UBA52P62987 128 aaKnown RBP13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 ALKAL2Q6UX46 152 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 VKORC1L1Q8N0U8 176 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 NRGNQ92686 78 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 FBXL17Q9UF56 701 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 CRYZL1O95825 349 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 PAX2Q02962 417 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 GPR157Q5UAW9 335 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 OR2C3Q8N628 320 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 OR10X1Q8NGY0 326 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 OR4S2Q8NH73 311 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 STOML3Q8TAV4 291 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 WFDC1Q9HC57 220 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 LYRM2Q9NU23 88 aaPredicted RBP13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 HSPB7Q9UBY9 170 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 UBQLN2Q9UHD9 624 aa13.95□□□□□ -0.18
FRMD4A-202ENST00000342409 TOR1AO14656 332 aa13.94□□□□□ -0.18
FRMD4A-202ENST00000342409 ATP6V1G1O75348 118 aa13.94□□□□□ -0.18
FRMD4A-202ENST00000342409 ATG12O94817 140 aa13.94□□□□□ -0.18
FRMD4A-202ENST00000342409 COX6B1P14854 86 aa13.94□□□□□ -0.18
FRMD4A-202ENST00000342409 REG1BP48304 166 aa13.94□□□□□ -0.18
FRMD4A-202ENST00000342409 NHLH2Q02577 135 aa13.94□□□□□ -0.18
FRMD4A-202ENST00000342409 H2BFWTQ7Z2G1 175 aa13.94□□□□□ -0.18
FRMD4A-202ENST00000342409 CLDND2Q8NHS1 167 aa13.94□□□□□ -0.18
FRMD4A-202ENST00000342409 PCNPQ8WW12 178 aaKnown RBP13.94□□□□□ -0.18
FRMD4A-202ENST00000342409 NABP2Q9BQ15 211 aa13.94□□□□□ -0.18
FRMD4A-202ENST00000342409 ONECUT1Q9UBC0 465 aa13.94□□□□□ -0.18
FRMD4A-202ENST00000342409 DOPEY2Q9Y3R5 2298 aa13.94□□□□□ -0.18
FRMD4A-202ENST00000342409 TRAV3A0A0B4J244 114 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 A0A1W2PPH5 198 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 FAM90A26D6RGX4 464 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 H0YJW9 148 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 SYNGR2O43760 224 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 IGKV1-16P04430 117 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 NQO2P16083 231 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 ARF6P62330 175 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 EWSR1Q01844 656 aaKnown RBP eCLIP13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 TNFRSF9Q07011 255 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 AARDQ4LEZ3 155 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 RPL7L1Q6DKI1 246 aaKnown RBP13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 FAM71F2Q6NXP2 309 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 SSX9Q7RTT3 188 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 TMEM252Q8N6L7 170 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 OR5AN1Q8NGI8 311 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 PTPN13Q12923 2485 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 MAP1AP78559 2803 aaPredicted RBP13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 WRBO00258 174 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 PLXNB1O43157 2135 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 IAPPP10997 89 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 PDLIM4P50479 330 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 POU2AF1Q16633 256 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 HLA-DRB5Q30154 266 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 HCP5Q6MZN7 132 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 OR8H3Q8N146 312 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 SCARB1Q8WTV0 552 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 TNFRSF14Q92956 283 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 TMEM186Q96B77 213 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 CLEC7AQ9BXN2 247 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 SMIM3Q9BZL3 60 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 RBKSQ9H477 322 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 ZC4H2Q9NQZ6 224 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 SLC35D1Q9NTN3 355 aa13.93□□□□□ -0.18
FRMD4A-202ENST00000342409 POLQO75417 2590 aa13.92□□□□□ -0.18
FRMD4A-202ENST00000342409 FAM90A9PA6NNJ1 464 aa13.92□□□□□ -0.18
FRMD4A-202ENST00000342409 SRRM4A7MD48 611 aaKnown RBP13.92□□□□□ -0.18
FRMD4A-202ENST00000342409 IL6RP08887 468 aaPredicted RBP13.92□□□□□ -0.18
FRMD4A-202ENST00000342409 PVALBP20472 110 aaPredicted RBP13.92□□□□□ -0.18
FRMD4A-202ENST00000342409 COX7A1P24310 79 aa13.92□□□□□ -0.18
FRMD4A-202ENST00000342409 COL8A1P27658 744 aa13.92□□□□□ -0.18
FRMD4A-202ENST00000342409 VAMP2P63027 116 aa13.92□□□□□ -0.18
FRMD4A-202ENST00000342409 RELBQ01201 579 aa13.92□□□□□ -0.18
FRMD4A-202ENST00000342409 LDLRAD2Q5SZI1 272 aa13.92□□□□□ -0.18
FRMD4A-202ENST00000342409 RAB40CQ96S21 281 aa13.92□□□□□ -0.18
FRMD4A-202ENST00000342409 QTRT1Q9BXR0 403 aaKnown RBP13.92□□□□□ -0.18
FRMD4A-202ENST00000342409 TMEM140Q9NV12 185 aa13.92□□□□□ -0.18
FRMD4A-202ENST00000342409 A8MXK9 166 aa13.91□□□□□ -0.18
FRMD4A-202ENST00000342409 VWC2LB2RUY7 222 aa13.91□□□□□ -0.18
FRMD4A-202ENST00000342409 M0R1W7 72 aa13.91□□□□□ -0.18
FRMD4A-202ENST00000342409 TAAR5O14804 337 aa13.91□□□□□ -0.18
FRMD4A-202ENST00000342409 CAV2P51636 162 aa13.91□□□□□ -0.18
FRMD4A-202ENST00000342409 UBE2KP61086 200 aa13.91□□□□□ -0.18
FRMD4A-202ENST00000342409 PNKDQ8N490 385 aa13.91□□□□□ -0.18
FRMD4A-202ENST00000342409 BEND2Q8NDZ0 799 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms