RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 BMPERQ8N8U9 685 aa11.5□□□□□ -0.57
TMEM248-201ENST00000341567 TAF15Q92804 592 aaKnown RBP eCLIP11.5□□□□□ -0.57
TMEM248-201ENST00000341567 RAB24Q969Q5 203 aa11.5□□□□□ -0.57
TMEM248-201ENST00000341567 STARD4Q96DR4 205 aa11.5□□□□□ -0.57
TMEM248-201ENST00000341567 COA4Q9NYJ1 87 aa11.5□□□□□ -0.57
TMEM248-201ENST00000341567 MALRD1Q5VYJ5 2156 aa11.5□□□□□ -0.57
TMEM248-201ENST00000341567 TCF21O43680 179 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 HOXA5P20719 270 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 PSG5Q15238 335 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 VKORC1L1Q8N0U8 176 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 HOXA6P31267 233 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 CLDN18P56856 261 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 MOB1BQ7L9L4 216 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 R3HDM4Q96D70 268 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 RCC1LQ96I51 464 aaKnown RBP11.49□□□□□ -0.57
TMEM248-201ENST00000341567 GINS3Q9BRX5 216 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 WFDC1Q9HC57 220 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 C5orf52A6NGY3 159 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 NCBP2LA6PVI3 153 aaKnown RBP11.49□□□□□ -0.57
TMEM248-201ENST00000341567 FAM157CP0CG43 387 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 CDH23Q9H251 3354 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 LOC102723971A0A1B0GUV8 181 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 RANP62826 216 aaKnown RBP11.49□□□□□ -0.57
TMEM248-201ENST00000341567 SERF2P84101 59 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 PARLQ9H300 379 aa11.49□□□□□ -0.57
TMEM248-201ENST00000341567 CSN3P07498 182 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 CSRP2Q16527 193 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 WDFY1Q8IWB7 410 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 FGFRL1Q8N441 504 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 KDF1Q8NAX2 398 aaPredicted RBP11.48□□□□□ -0.57
TMEM248-201ENST00000341567 ANAPC16Q96DE5 110 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 MANBALQ9NQG1 85 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 LTBP2Q14767 1821 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 LY6G6EA0A0G2JKS1 128 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 HRASP01112 189 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 TRAT1Q6PIZ9 186 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 C9orf106Q8NAJ2 232 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 OR1L6Q8NGR2 347 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 BLNKQ8WV28 456 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 ABHD17AQ96GS6 310 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 U3KQA8 63 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 COX7A2P2O60397 106 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 HIST1H2BKO60814 126 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 IGHV3-48P01763 117 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 HIST1H2BJP06899 126 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 HIST1H2BOP23527 126 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 IL3RAP26951 378 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 OR10J1P30954 320 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 HIST1H2BBP33778 126 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 HIST1H2BDP58876 126 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 RHOBP62745 196 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 HIST1H2BCP62807 126 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 ERHP84090 104 aaKnown RBP11.48□□□□□ -0.57
TMEM248-201ENST00000341567 HIST2H2BEQ16778 126 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 HLA-DRB5Q30154 266 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 SLC25A53Q5H9E4 307 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.48□□□□□ -0.57
TMEM248-201ENST00000341567 ZNF596Q8TC21 504 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 CORO2AQ92828 525 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 HIST1H2BHQ93079 126 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 HIST1H2BNQ99877 126 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 HIST1H2BMQ99879 126 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 GNB4Q9HAV0 340 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 RNF7Q9UBF6 113 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 WIPI2Q9Y4P8 454 aa11.48□□□□□ -0.57
TMEM248-201ENST00000341567 E9PLN8 166 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 CD5P06127 495 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 CECR9P0C854 216 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 RPL11P62913 178 aaKnown RBP11.47□□□□□ -0.57
TMEM248-201ENST00000341567 PSG7Q13046 419 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 FAM166AQ6J272 317 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 REC114Q7Z4M0 266 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 GGNQ86UU5 652 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 NOL4LQ96MY1 436 aaPredicted RBP11.47□□□□□ -0.57
TMEM248-201ENST00000341567 SERTM2A0A1B0GWG4 89 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 RPL31P62899 125 aaKnown RBP11.47□□□□□ -0.57
TMEM248-201ENST00000341567 FOXF2Q12947 444 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 ATP6V1FQ16864 119 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 PRDM14Q9GZV8 571 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 OOEPA6NGQ2 149 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 H0Y980 276 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 UBE2CO00762 179 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 MPV17P39210 176 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 AARDQ4LEZ3 155 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 MISP3Q96FF7 219 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 MARS2Q96GW9 593 aaKnown RBP11.47□□□□□ -0.57
TMEM248-201ENST00000341567 ABCA2Q9BZC7 2435 aa11.47□□□□□ -0.57
TMEM248-201ENST00000341567 CDX4O14627 284 aaPredicted RBP11.46□□□□□ -0.57
TMEM248-201ENST00000341567 CD3EP07766 207 aa11.46□□□□□ -0.57
TMEM248-201ENST00000341567 CT45A6P0DMU7 189 aa11.46□□□□□ -0.57
TMEM248-201ENST00000341567 CT45A5P0DMU8 189 aa11.46□□□□□ -0.57
TMEM248-201ENST00000341567 CT45A7P0DMV0 189 aa11.46□□□□□ -0.57
TMEM248-201ENST00000341567 CD82P27701 267 aa11.46□□□□□ -0.57
TMEM248-201ENST00000341567 CT45A1Q5HYN5 189 aa11.46□□□□□ -0.57
TMEM248-201ENST00000341567 CT45A3Q8NHU0 189 aa11.46□□□□□ -0.57
TMEM248-201ENST00000341567 TECRQ9NZ01 308 aaKnown RBP11.46□□□□□ -0.57
TMEM248-201ENST00000341567 IGKV1-12A0A0C4DH73 117 aa11.46□□□□□ -0.57
TMEM248-201ENST00000341567 DBX1A6NMT0 343 aa11.46□□□□□ -0.57
TMEM248-201ENST00000341567 SLC31A2O15432 143 aa11.46□□□□□ -0.57
TMEM248-201ENST00000341567 IGKV1D-12P01611 117 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms