RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 ADH4P08319 380 aa12.45□□□□□ -0.42
TPM3-208ENST00000341485 RAB5AP20339 215 aa12.45□□□□□ -0.42
TPM3-208ENST00000341485 AGAP20933 346 aa12.45□□□□□ -0.42
TPM3-208ENST00000341485 SERF2P84101 59 aa12.45□□□□□ -0.42
TPM3-208ENST00000341485 ADAM5Q6NVV9 412 aa12.45□□□□□ -0.42
TPM3-208ENST00000341485 ZNF429Q86V71 674 aa12.45□□□□□ -0.42
TPM3-208ENST00000341485 TCTEX1D1Q8N7M0 179 aa12.45□□□□□ -0.42
TPM3-208ENST00000341485 ZNF665Q9H7R5 613 aa12.45□□□□□ -0.42
TPM3-208ENST00000341485 ZG16O60844 167 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 FGF8P55075 233 aaPredicted RBP12.44□□□□□ -0.42
TPM3-208ENST00000341485 TMEM41BQ5BJD5 291 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 GCSAMQ8N6F7 178 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 ZDHHC16Q969W1 377 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 HSD17B10Q99714 261 aaKnown RBP12.44□□□□□ -0.42
TPM3-208ENST00000341485 PMS2P5A8MQ11 134 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 VSTM5A8MXK1 200 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 OR2C1O95371 312 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 MAS1LP35410 378 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 CFHR2P36980 270 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 ELLP55199 621 aaPredicted RBP12.44□□□□□ -0.42
TPM3-208ENST00000341485 H2BFWTQ7Z2G1 175 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 FAM90A1Q86YD7 464 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 ZNF561Q8N587 486 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 OR10G4Q8NGN3 311 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 LINC01560Q8TB33 94 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 DTD1Q8TEA8 209 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 MEGF10Q96KG7 1140 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 SNX22Q96L94 193 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 OR2V2Q96R30 315 aa12.44□□□□□ -0.42
TPM3-208ENST00000341485 CISD1Q9NZ45 108 aaKnown RBP12.44□□□□□ -0.42
TPM3-208ENST00000341485 ZFP92A6NM28 416 aa12.43□□□□□ -0.42
TPM3-208ENST00000341485 ZNF727A8MUV8 499 aa12.43□□□□□ -0.42
TPM3-208ENST00000341485 PROP1O75360 226 aa12.43□□□□□ -0.42
TPM3-208ENST00000341485 BCL2P10415 239 aa12.43□□□□□ -0.42
TPM3-208ENST00000341485 DLK1P80370 383 aa12.43□□□□□ -0.42
TPM3-208ENST00000341485 NCMAPQ5T1S8 102 aa12.43□□□□□ -0.42
TPM3-208ENST00000341485 NCR3LG1Q68D85 454 aa12.43□□□□□ -0.42
TPM3-208ENST00000341485 MOGAT3Q86VF5 341 aa12.43□□□□□ -0.42
TPM3-208ENST00000341485 PLPPR2Q96GM1 343 aa12.43□□□□□ -0.42
TPM3-208ENST00000341485 TIMM9Q9Y5J7 89 aa12.43□□□□□ -0.42
TPM3-208ENST00000341485 DOCK11Q5JSL3 2073 aa12.43□□□□□ -0.42
TPM3-208ENST00000341485 A0A1W2PPE3 182 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 MGST3O14880 152 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 IGKV1D-33P01593 117 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 IGKV1-33P01594 117 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 OR4A8P0C604 315 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 GRNP28799 593 aaKnown RBP12.42□□□□□ -0.42
TPM3-208ENST00000341485 TAGLN2P37802 199 aaKnown RBP12.42□□□□□ -0.42
TPM3-208ENST00000341485 SNRPEP62304 92 aaKnown RBP12.42□□□□□ -0.42
TPM3-208ENST00000341485 SPINK9Q5DT21 86 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 PINX1Q96BK5 328 aaKnown RBP12.42□□□□□ -0.42
TPM3-208ENST00000341485 MALSU1Q96EH3 234 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 TVP23CQ96ET8 276 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 SEBOXQ9HB31 216 aaPredicted RBP12.42□□□□□ -0.42
TPM3-208ENST00000341485 PCNX1Q96RV3 2341 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 SPTA1P02549 2419 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 EIF3GO75821 320 aaKnown RBP eCLIP12.42□□□□□ -0.42
TPM3-208ENST00000341485 IFNA4P05014 189 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 GZMHP20718 246 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 DUTP33316 252 aaKnown RBP12.42□□□□□ -0.42
TPM3-208ENST00000341485 GPR12P47775 334 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 RPS16P62249 146 aaKnown RBP12.42□□□□□ -0.42
TPM3-208ENST00000341485 HNF4GQ14541 408 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 CDSNQ15517 529 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 CR1LQ2VPA4 569 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 MORN2Q502X0 79 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 FAM90A2PQ658T7 463 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 CENPVQ7Z7K6 275 aaPredicted RBP12.42□□□□□ -0.42
TPM3-208ENST00000341485 NIPSNAP3BQ9BS92 247 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 TMEM147Q9BVK8 224 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 GNG12Q9UBI6 72 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 LAMP3Q9UQV4 416 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 POLEQ07864 2286 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 CADP27708 2225 aa12.42□□□□□ -0.42
TPM3-208ENST00000341485 A0A087WWC5 75 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 MAP1LC3B2A6NCE7 125 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 ZNF98A6NK75 572 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 MARCH11A6NNE9 402 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 CD3EP07766 207 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 GNLYP22749 145 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 TNFSF4P23510 183 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 ADIPOQQ15848 244 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 ATP6V1FQ16864 119 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 ACSM6Q6P461 480 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 SLC35E3Q7Z769 313 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 ZNRF1Q8ND25 227 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 ITLN1Q8WWA0 313 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 EDARADDQ8WWZ3 215 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 R3HDM4Q96D70 268 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 MAP1LC3BQ9GZQ8 125 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 JPT1Q9UK76 154 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.41□□□□□ -0.42
TPM3-208ENST00000341485 C5orf52A6NGY3 159 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 LHBP01229 141 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 OR9G9P0C7N8 305 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 RAB11AP62491 216 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 TNFAIP6P98066 277 aaPredicted RBP12.41□□□□□ -0.42
TPM3-208ENST00000341485 PPP1R35Q8TAP8 253 aa12.41□□□□□ -0.42
TPM3-208ENST00000341485 CIB3Q96Q77 187 aaPredicted RBP12.41□□□□□ -0.42
TPM3-208ENST00000341485 QTRT1Q9BXR0 403 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms