RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 MDKP21741 143 aaPredicted RBP12.12□□□□□ -0.47
TDP2-201ENST00000341060 TFF3Q07654 80 aa12.12□□□□□ -0.47
TDP2-201ENST00000341060 P2RY6Q15077 328 aa12.12□□□□□ -0.47
TDP2-201ENST00000341060 CYP2G1PQ6ZSU1 146 aa12.12□□□□□ -0.47
TDP2-201ENST00000341060 OR10G9Q8NGN4 311 aa12.12□□□□□ -0.47
TDP2-201ENST00000341060 OR10G7Q8NGN6 311 aa12.12□□□□□ -0.47
TDP2-201ENST00000341060 FAM210BQ96KR6 192 aa12.12□□□□□ -0.47
TDP2-201ENST00000341060 NAT8Q9UHE5 227 aa12.12□□□□□ -0.47
TDP2-201ENST00000341060 NBEAQ8NFP9 2946 aa12.12□□□□□ -0.47
TDP2-201ENST00000341060 DSCAMO60469 2012 aa12.12□□□□□ -0.47
TDP2-201ENST00000341060 SRRM5B3KS81 715 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 TMEM250H0YL14 139 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 TRGC2P03986 189 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 PRDX2P32119 198 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 NDUFA6P56556 154 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 LINC00205P59089 165 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 GNB2P62879 340 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 EDDM3AQ14507 147 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 FAM169BQ8N8A8 192 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 FAM216AQ8WUB2 273 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 STARD4Q96DR4 205 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 SMIM7Q9BQ49 75 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 DCTN5Q9BTE1 182 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 CTDSP1Q9GZU7 261 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 OPN3Q9H1Y3 402 aaPredicted RBP12.11□□□□□ -0.47
TDP2-201ENST00000341060 OR51M1Q9H341 326 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 PROCRQ9UNN8 238 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 TRBV24-1A0A075B6N3 115 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 IFITM10A6NMD0 228 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 NDUFS6O75380 124 aaKnown RBP12.11□□□□□ -0.47
TDP2-201ENST00000341060 OPN1MWP04001 364 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 OPN1MW2P0DN77 364 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 OPN1MW3P0DN78 364 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 EGR1P18146 543 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 DUTP33316 252 aaKnown RBP12.11□□□□□ -0.47
TDP2-201ENST00000341060 PSMB3P49720 205 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 AARDQ4LEZ3 155 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 FFAR4Q5NUL3 377 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 BHLHA15Q7RTS1 189 aaPredicted RBP12.11□□□□□ -0.47
TDP2-201ENST00000341060 OR2Z1Q8NG97 314 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 R3HDM4Q96D70 268 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 MANBALQ9NQG1 85 aa12.11□□□□□ -0.47
TDP2-201ENST00000341060 IGKV1D-17A0A075B6S4 117 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 TGOLN2O43493 480 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 KBTBD11O94819 623 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 GZMHP20718 246 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 GPR12P47775 334 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 NCR3LG1Q68D85 454 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 FAM90A1Q86YD7 464 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 ACTR3CQ9C0K3 210 aaPredicted RBP12.1□□□□□ -0.47
TDP2-201ENST00000341060 JPT1Q9UK76 154 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 SLC25A15Q9Y619 301 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 FAM90A9PA6NNJ1 464 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 C17orf112F2Z3M2 114 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 HMGB3O15347 200 aaKnown RBP12.1□□□□□ -0.47
TDP2-201ENST00000341060 PROP1O75360 226 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 OR9G9P0C7N8 305 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 CFHR2P36980 270 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 CR1LQ2VPA4 569 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 MORN2Q502X0 79 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 SPINK9Q5DT21 86 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 ZNF709Q8N972 641 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 SSX3Q99909 188 aa12.1□□□□□ -0.47
TDP2-201ENST00000341060 QTRT1Q9BXR0 403 aaKnown RBP12.1□□□□□ -0.47
TDP2-201ENST00000341060 C15orf62A8K5M9 175 aa12.09□□□□□ -0.47
TDP2-201ENST00000341060 GFRA3O60609 400 aa12.09□□□□□ -0.47
TDP2-201ENST00000341060 LY86O95711 162 aa12.09□□□□□ -0.47
TDP2-201ENST00000341060 HPRT1P00492 218 aa12.09□□□□□ -0.47
TDP2-201ENST00000341060 PLA2G5P39877 138 aa12.09□□□□□ -0.47
TDP2-201ENST00000341060 TMEM241Q24JQ0 296 aa12.09□□□□□ -0.47
TDP2-201ENST00000341060 SPNS3Q6ZMD2 512 aa12.09□□□□□ -0.47
TDP2-201ENST00000341060 RAB24Q969Q5 203 aa12.09□□□□□ -0.47
TDP2-201ENST00000341060 GAR1Q9NY12 217 aaKnown RBP12.09□□□□□ -0.47
TDP2-201ENST00000341060 GNG12Q9UBI6 72 aa12.09□□□□□ -0.47
TDP2-201ENST00000341060 MIOXQ9UGB7 285 aa12.09□□□□□ -0.47
TDP2-201ENST00000341060 CADP27708 2225 aa12.09□□□□□ -0.47
TDP2-201ENST00000341060 DMXL2Q8TDJ6 3036 aa12.09□□□□□ -0.47
TDP2-201ENST00000341060 MBD3L4A6NDZ8 208 aaPredicted RBP12.08□□□□□ -0.47
TDP2-201ENST00000341060 MBD3L3A6NE82 208 aaPredicted RBP12.08□□□□□ -0.47
TDP2-201ENST00000341060 MBD3L5A6NJ08 208 aaPredicted RBP12.08□□□□□ -0.47
TDP2-201ENST00000341060 LINC00587B1AMM8 73 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 MGST3O14880 152 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 YPEL1O60688 119 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 FCGR3BO75015 233 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 S100PP25815 95 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 RPS16P62249 146 aaKnown RBP12.08□□□□□ -0.47
TDP2-201ENST00000341060 ADIRFQ15847 76 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 LTC4SQ16873 150 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 GCSAMQ8N6F7 178 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 Q8N7P7 452 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 MBD3L2Q8NHZ7 208 aaPredicted RBP12.08□□□□□ -0.47
TDP2-201ENST00000341060 PPP1R35Q8TAP8 253 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 SNX22Q96L94 193 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 YPEL2Q96QA6 119 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 DIRC2Q96SL1 478 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 GGACTQ9BVM4 153 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 OR6C3Q9NZP0 311 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 DUSP13Q9UII6 198 aa12.08□□□□□ -0.47
TDP2-201ENST00000341060 NKX6-1P78426 367 aaPredicted RBP12.08□□□□□ -0.48
TDP2-201ENST00000341060 MSMPQ1L6U9 139 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms