RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 CUL9Q8IWT3 2517 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 EP300Q09472 2414 aaPredicted RBP8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 MAP1LC3B2A6NCE7 125 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 PRSS46E5RG02 174 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RELBQ01201 579 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 MEF2CQ06413 473 aaPredicted RBP8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 HAGHQ16775 308 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 FAM53AQ6NSI3 398 aaPredicted RBP8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 HEPN1Q6WQI6 88 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 Q8N7P7 452 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TPRX1Q8N7U7 411 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 C8orf31Q8N9H6 132 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 MAP1LC3BQ9GZQ8 125 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 VSIRQ9H7M9 311 aa8.86□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TRGV10A0A0A0MS01 117 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 UBE2L5PA0A1B0GUS4 154 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 C5orf52A6NGY3 159 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 C16orf97H3BN30 126 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TNFRSF1AP19438 455 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RND2P52198 227 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ZNF134P52741 427 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 EDDM3AQ14507 147 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 BTNL3Q6UXE8 466 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 S1PR3Q99500 378 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 NPCDR1Q9BY65 106 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 FOXA2Q9Y261 457 aaPredicted RBP8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 IGHV3-43A0A0B4J1X8 118 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 MED19A0JLT2 244 aaPredicted RBP8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 K7EM74 188 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 UBE2CO00762 179 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TGOLN2O43493 480 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 OR9G9P0C7N8 305 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 IGHV3-43DP0DP04 118 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ERVK-16P61578 105 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 DLK1P80370 383 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 HOXA4Q00056 320 aaPredicted RBP8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 SPRNQ5BIV9 151 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TCF23Q7RTU1 214 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ZNRF1Q8ND25 227 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RFESDQ8TAC1 157 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 DCTN5Q9BTE1 182 aa8.85□□□□□ -0.99
TRAF3IP2-201ENST00000340026 A0A0G2JNJ9 132 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 C15orf61A6NNL5 157 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 SPRY3O43610 288 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TFF1P04155 84 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 FAM27E3Q08E93 113 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 FAM71F2Q6NXP2 309 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ACSM6Q6P461 480 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 SSX7Q7RTT5 188 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 Q8NA96 180 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ACTR3CQ9C0K3 210 aaPredicted RBP8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 CTDSP1Q9GZU7 261 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 IDI2-AS1Q9NZ38 188 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 METTL1Q9UBP6 276 aaKnown RBP8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 Q9UFV3 132 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ZNF257Q9Y2Q1 563 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 LINC00312Q9Y6C7 94 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 SMCO3A2RU48 225 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 M0R1X1 148 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 OR2C1O95371 312 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 IGKV1D-33P01593 117 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 IGKV1-33P01594 117 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 IGHV2-5P01817 119 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 CT45A1Q5HYN5 189 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 OR8G2PQ6IF36 304 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 SLC25A48Q6ZT89 311 aaKnown RBP8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 OR13D1Q8NGV5 346 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 CT45A3Q8NHU0 189 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 ZNF596Q8TC21 504 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TXNDC17Q9BRA2 123 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 QTRT1Q9BXR0 403 aaKnown RBP8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 KCNIP2Q9NS61 270 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 TMEM14BQ9NUH8 114 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 SLC39A9Q9NUM3 307 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 GNG13Q9P2W3 67 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 RPUSD1Q9UJJ7 312 aaKnown RBP8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 PUS1Q9Y606 427 aaKnown RBP eCLIP8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 DSCAMO60469 2012 aa8.84□□□□□ -0.99
TRAF3IP2-201ENST00000340026 CELSR3Q9NYQ7 3312 aa8.84□□□□□ -1
TRAF3IP2-201ENST00000340026 CEBPZOSA8MTT3 80 aa8.84□□□□□ -1
TRAF3IP2-201ENST00000340026 FCGR3BO75015 233 aa8.84□□□□□ -1
TRAF3IP2-201ENST00000340026 FSTL3O95633 263 aa8.84□□□□□ -1
TRAF3IP2-201ENST00000340026 FGF7P21781 194 aa8.84□□□□□ -1
TRAF3IP2-201ENST00000340026 OR2B8PP59922 312 aa8.84□□□□□ -1
TRAF3IP2-201ENST00000340026 OR2B11Q5JQS5 317 aa8.84□□□□□ -1
TRAF3IP2-201ENST00000340026 PRAMEF5Q5TYX0 476 aa8.84□□□□□ -1
TRAF3IP2-201ENST00000340026 OR4A16Q8NH70 328 aa8.84□□□□□ -1
TRAF3IP2-201ENST00000340026 ZDHHC16Q969W1 377 aa8.84□□□□□ -1
TRAF3IP2-201ENST00000340026 SDF2L1Q9HCN8 221 aa8.84□□□□□ -1
TRAF3IP2-201ENST00000340026 PRR14LQ5THK1 2151 aa8.83□□□□□ -1
TRAF3IP2-201ENST00000340026 A0A1W2PPH5 198 aa8.83□□□□□ -1
TRAF3IP2-201ENST00000340026 C17orf100A8MU93 164 aa8.83□□□□□ -1
TRAF3IP2-201ENST00000340026 TNFRSF13BO14836 293 aaPredicted RBP8.83□□□□□ -1
TRAF3IP2-201ENST00000340026 CYB5BO43169 146 aa8.83□□□□□ -1
TRAF3IP2-201ENST00000340026 GFRA3O60609 400 aa8.83□□□□□ -1
TRAF3IP2-201ENST00000340026 IRF2P14316 349 aa8.83□□□□□ -1
TRAF3IP2-201ENST00000340026 OPRK1P41145 380 aa8.83□□□□□ -1
TRAF3IP2-201ENST00000340026 PSMB3P49720 205 aa8.83□□□□□ -1
TRAF3IP2-201ENST00000340026 MEF2BQ02080 365 aaPredicted RBP8.83□□□□□ -1
TRAF3IP2-201ENST00000340026 ACOT6Q3I5F7 207 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms