RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 ANKHD1Q8IWZ3 2542 aaKnown RBP10.09□□□□□ -0.79
USP1-201ENST00000339950 UBE2CO00762 179 aa10.09□□□□□ -0.79
USP1-201ENST00000339950 RRP8O43159 456 aaKnown RBP10.09□□□□□ -0.79
USP1-201ENST00000339950 BCL2P10415 239 aa10.09□□□□□ -0.79
USP1-201ENST00000339950 CTSSP25774 331 aa10.09□□□□□ -0.79
USP1-201ENST00000339950 ZFP36L1Q07352 338 aaKnown RBP10.09□□□□□ -0.79
USP1-201ENST00000339950 FOXO1Q12778 655 aa10.09□□□□□ -0.79
USP1-201ENST00000339950 IL15RAQ13261 267 aa10.09□□□□□ -0.79
USP1-201ENST00000339950 ICAM4Q14773 271 aa10.09□□□□□ -0.79
USP1-201ENST00000339950 ZNF718Q3SXZ3 478 aa10.09□□□□□ -0.79
USP1-201ENST00000339950 MIC13Q5XKP0 118 aa10.09□□□□□ -0.79
USP1-201ENST00000339950 REC114Q7Z4M0 266 aa10.09□□□□□ -0.79
USP1-201ENST00000339950 RAB24Q969Q5 203 aa10.09□□□□□ -0.79
USP1-201ENST00000339950 C1QTNF5Q9BXJ0 243 aa10.09□□□□□ -0.79
USP1-201ENST00000339950 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.09□□□□□ -0.79
USP1-201ENST00000339950 PITPNC1Q9UKF7 332 aa10.09□□□□□ -0.79
USP1-201ENST00000339950 PTPN13Q12923 2485 aa10.09□□□□□ -0.79
USP1-201ENST00000339950 IGHV3-72A0A0B4J1Y9 119 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 GRIFINA4D1Z8 144 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 OR5B21A6NL26 309 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 IFNL4K9M1U5 179 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 OR10J4P0C629 311 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 COX5AP20674 150 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 RPL30P62888 115 aaKnown RBP10.08□□□□□ -0.8
USP1-201ENST00000339950 FOXF2Q12947 444 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 RIPPLY2Q5TAB7 128 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 NHLRC2Q8NBF2 726 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 OR4D5Q8NGN0 318 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 ACTR3CQ9C0K3 210 aaPredicted RBP10.08□□□□□ -0.8
USP1-201ENST00000339950 SELENOKQ9Y6D0 94 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 DMXL2Q8TDJ6 3036 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 C11orf94C9JXX5 98 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 H3BTX0 84 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 HIST1H2BKO60814 126 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 HIST1H2BJP06899 126 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 IRF2P14316 349 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 HIST1H2BOP23527 126 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 HIST1H2BBP33778 126 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 HIST1H2BDP58876 126 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 HIST1H2BCP62807 126 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 SUMO1P63165 101 aaKnown RBP10.08□□□□□ -0.8
USP1-201ENST00000339950 HIST2H2BEQ16778 126 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.08□□□□□ -0.8
USP1-201ENST00000339950 OR2T10Q8NGZ9 312 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 HIST1H2BHQ93079 126 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 R3HDM4Q96D70 268 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 HIST1H2BNQ99877 126 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 HIST1H2BMQ99879 126 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 ZNRD1Q9P1U0 126 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 MPC1Q9Y5U8 109 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 C20orf202A1L168 122 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 TRIP6Q15654 476 aaKnown RBP10.08□□□□□ -0.8
USP1-201ENST00000339950 KIAA1644Q3SXP7 199 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 OR13A1Q8NGR1 328 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 TAF15Q92804 592 aaKnown RBP eCLIP10.08□□□□□ -0.8
USP1-201ENST00000339950 HIPK2Q9H2X6 1198 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 TANC2Q9HCD6 1990 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 ACACBO00763 2458 aa10.08□□□□□ -0.8
USP1-201ENST00000339950 A0A1B0GUS0 222 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 ODAMA1E959 279 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 CEACAM18A8MTB9 384 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 H0Y980 276 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 UCP1P25874 307 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 OR4C5Q8NGB2 326 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 S1PR3Q99500 378 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 PRDM14Q9GZV8 571 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 A6NNC1 897 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 RNF212BA8MTL3 300 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 LYL1P12980 280 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 CDC34P49427 236 aaPredicted RBP10.07□□□□□ -0.8
USP1-201ENST00000339950 RNPS1Q15287 305 aaKnown RBP10.07□□□□□ -0.8
USP1-201ENST00000339950 FAM216AQ8WUB2 273 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 CCL17Q92583 94 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 RIMS4Q9H426 269 aaPredicted RBP10.07□□□□□ -0.8
USP1-201ENST00000339950 CLDN14O95500 239 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 IL18BPO95998 194 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 IGKV1-5P01602 117 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 SOD3P08294 240 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 HOXA5P20719 270 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 AMTP48728 403 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 HNRNPA3P51991 378 aaKnown RBP10.07□□□□□ -0.8
USP1-201ENST00000339950 ABHD5Q8WTS1 349 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 ELOA3CA0A087WX78 387 aaPredicted RBP10.07□□□□□ -0.8
USP1-201ENST00000339950 SEMA5BQ9P283 1151 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 SPRR3Q9UBC9 169 aa10.07□□□□□ -0.8
USP1-201ENST00000339950 PTPRQQ9UMZ3 2332 aa10.06□□□□□ -0.8
USP1-201ENST00000339950 GFRA1P56159 465 aa10.06□□□□□ -0.8
USP1-201ENST00000339950 GNB1P62873 340 aa10.06□□□□□ -0.8
USP1-201ENST00000339950 RPP30P78346 268 aaKnown RBP10.06□□□□□ -0.8
USP1-201ENST00000339950 C10orf91Q5T1B1 145 aa10.06□□□□□ -0.8
USP1-201ENST00000339950 Q6ZN92 141 aa10.06□□□□□ -0.8
USP1-201ENST00000339950 IMMP2LQ96T52 175 aa10.06□□□□□ -0.8
USP1-201ENST00000339950 TMPRSS2O15393 492 aa10.06□□□□□ -0.8
USP1-201ENST00000339950 SIAH2O43255 324 aa10.06□□□□□ -0.8
USP1-201ENST00000339950 HIST1H1BP16401 226 aaKnown RBP10.06□□□□□ -0.8
USP1-201ENST00000339950 ATP5G3P48201 142 aa10.06□□□□□ -0.8
USP1-201ENST00000339950 TFPI2P48307 235 aa10.06□□□□□ -0.8
USP1-201ENST00000339950 TCTAP57738 103 aa10.06□□□□□ -0.8
USP1-201ENST00000339950 ATOH7Q8N100 152 aa10.06□□□□□ -0.8
USP1-201ENST00000339950 CCL13Q99616 98 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms