RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 MEF2CQ06413 473 aaPredicted RBP3.52□□□□□ -1.85
NEDD4-201ENST00000338963 CATR1Q13166 79 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 ZNRF2Q8NHG8 242 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 MBNL3Q9NUK0 354 aaKnown RBP3.52□□□□□ -1.85
NEDD4-201ENST00000338963 RFNGQ9Y644 331 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 LINC00312Q9Y6C7 94 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 RHODO00212 210 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 FOXG1P55316 489 aaPredicted RBP3.52□□□□□ -1.85
NEDD4-201ENST00000338963 HHEXQ03014 270 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 DUSP2Q05923 314 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 DLX2Q07687 328 aaPredicted RBP3.52□□□□□ -1.85
NEDD4-201ENST00000338963 RBPMS2Q6ZRY4 209 aaKnown RBP3.52□□□□□ -1.85
NEDD4-201ENST00000338963 RNF44Q7L0R7 432 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 PRSS41Q7RTY9 318 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 RFLNBQ8N5W9 214 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 VN1R2Q8NFZ6 395 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 KLK6Q92876 244 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 MBD6Q96DN6 1003 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 KCNK15Q9H427 330 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 GCM1Q9NP62 436 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 OBP2BQ9NPH6 170 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 TMEM167BQ9NRX6 74 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 IL36RNQ9UBH0 155 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 TP53TG3Q9ULZ0 132 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 A0A1W2PQH9 124 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 DCAF4L2Q8NA75 395 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 TRIB1Q96RU8 372 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 ULBP3Q9BZM4 244 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 S1PR5Q9H228 398 aa3.52□□□□□ -1.85
NEDD4-201ENST00000338963 RGPD2P0DJD1 1756 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 A0A087WX48 190 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 CST7O76096 145 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 LYPD3O95274 346 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 CPMP14384 443 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 CTXN1P60606 82 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 RTP5Q14D33 572 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 OVCA2Q8WZ82 227 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 C11orf52Q96A22 123 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 SLC35A4Q96G79 324 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF835Q9Y2P0 537 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 KLF12Q9Y4X4 402 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 DNAJC25-GNG10A0A024R161 153 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 MED19A0JLT2 244 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-201ENST00000338963 C8orf88P0DMB2 117 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 NPPBP16860 134 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 TMEM50BP56557 158 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 QRFPP83859 136 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 IGFBP7Q16270 282 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 MEIG1Q5JSS6 88 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 C6orf201Q7Z4U5 140 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 NAT6Q93015 286 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 MMABQ96EY8 250 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-201ENST00000338963 ASCL2Q99929 193 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 APOOQ9BUR5 198 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 TM2D1Q9BX74 207 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 CLCF1Q9UBD9 225 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 TRAV5A0A0B4J249 113 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 TNFSF12O43508 249 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 BNIP3LO60238 219 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 BRI3O95415 125 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 SGCBQ16585 318 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 ABHD17BQ5VST6 288 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 MOGAT3Q86VF5 341 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF683Q8IZ20 524 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 OR2H1Q9GZK4 316 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 C20orf141Q9NUB4 165 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 PIGLQ9Y2B2 252 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 QSER1Q2KHR3 1735 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 SHISA8B8ZZ34 492 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 BMPR1BO00238 502 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 SLC25A5P05141 298 aaKnown RBP3.51□□□□□ -1.85
NEDD4-201ENST00000338963 SCGB1C2P0DMR2 95 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 IL9P15248 144 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 SLC25A53Q5H9E4 307 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 MRPL2Q5T653 305 aaKnown RBP3.51□□□□□ -1.85
NEDD4-201ENST00000338963 SMRP1Q8NCR6 262 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 TNFRSF19Q9NS68 423 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 MSRB2Q9Y3D2 182 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 OR1A2Q9Y585 309 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 LAMB2P55268 1798 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 SPAARA0A1B0GVQ0 90 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 FAM90A10PA6NDY2 464 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 FAM90A18PA6NE21 464 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 FAM90A16PA6NEW6 464 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 FAM90A20PA6NIJ5 464 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 FAM90A8PA6NJQ4 464 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 FAM90A7PA6NKC0 464 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 FAM90A22PA8MWA6 464 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 A8MWV9 139 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 FAM90A12PA8MX19 464 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 FAM90A5PA8MXJ8 464 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 FAM90A23PA8MXZ1 464 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 CHST1O43916 411 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 NEURL1O76050 574 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 STC2O76061 302 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 CRYAAP02489 173 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 SP1P08047 785 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 FAM90A15PP0C7V4 464 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 FAM90A13PP0C7W8 464 aa3.51□□□□□ -1.85
NEDD4-201ENST00000338963 FAM90A14PP0C7W9 464 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms