RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 SMIM21Q3B7S5 101 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 Q8WTZ3 238 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 C10orf35Q96D05 121 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 R3HDM4Q96D70 268 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 GALNT14Q96FL9 552 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 CCL13Q99616 98 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 ZNRD1Q9P1U0 126 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 CXCL1P09341 107 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 MYOD1P15172 320 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 GALR1P47211 349 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 ZNF90Q03938 601 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 TMEM241Q24JQ0 296 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 BSXQ3C1V8 233 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 MIC13Q5XKP0 118 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 SPNS3Q6ZMD2 512 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 BAGE3Q86Y29 109 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 BAGE2Q86Y30 109 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 OR13A1Q8NGR1 328 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 FAM216AQ8WUB2 273 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 OR5P3Q8WZ94 311 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 SARAFQ96BY9 339 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 RCC1LQ96I51 464 aaKnown RBP6.95□□□□□ -1.3
HPS4-201ENST00000336873 OR2V2Q96R30 315 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 GPR87Q9BY21 358 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 ACTR3CQ9C0K3 210 aaPredicted RBP6.95□□□□□ -1.3
HPS4-201ENST00000336873 ZDHHC8Q9ULC8 765 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 ZZEF1O43149 2961 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 MDFIC2A0A1B0GVS7 189 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 C11orf94C9JXX5 98 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 RRP8O43159 456 aaKnown RBP6.95□□□□□ -1.3
HPS4-201ENST00000336873 CYB5R3P00387 301 aaPredicted RBP6.95□□□□□ -1.3
HPS4-201ENST00000336873 ARL16Q0P5N6 197 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 IL24Q13007 206 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 DMRTA1Q5VZB9 504 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 FAM214BQ7L5A3 538 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 RAB24Q969Q5 203 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 C1QTNF5Q9BXJ0 243 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 DMXL1Q9Y485 3027 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 XKRY2A2RUG3 117 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 IL18BPO95998 194 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 OTX1P32242 354 aaPredicted RBP6.95□□□□□ -1.3
HPS4-201ENST00000336873 FAM27E3Q08E93 113 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 KIAA1644Q3SXP7 199 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 SAPCD1Q5SSQ6 148 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 LYPD6Q86Y78 171 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 ZADH2Q8N4Q0 377 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 CISD2Q8N5K1 135 aaKnown RBP6.95□□□□□ -1.3
HPS4-201ENST00000336873 MISP3Q96FF7 219 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 HSD17B10Q99714 261 aaKnown RBP6.95□□□□□ -1.3
HPS4-201ENST00000336873 PRDM14Q9GZV8 571 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 SPRR3Q9UBC9 169 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 NAV3Q8IVL0 2385 aa6.95□□□□□ -1.3
HPS4-201ENST00000336873 USP9XQ93008 2570 aaPredicted RBP6.95□□□□□ -1.3
HPS4-201ENST00000336873 ODAMA1E959 279 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 GRIFINA4D1Z8 144 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 C1QTNF9BB2RNN3 333 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 B4E171 279 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 NTN3O00634 580 aaPredicted RBP6.94□□□□□ -1.3
HPS4-201ENST00000336873 GYPAP02724 150 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 TRGC1P0CF51 173 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 IGHV1-2P23083 117 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 COL8A2P25067 703 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 CDC34P49427 236 aaPredicted RBP6.94□□□□□ -1.3
HPS4-201ENST00000336873 RPL30P62888 115 aaKnown RBP6.94□□□□□ -1.3
HPS4-201ENST00000336873 STUMQ69YW2 141 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 OR4P4Q8NGL7 312 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 ELOVL1Q9BW60 279 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 KIAA1456Q9P272 454 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 IGLV3-32A0A0A0MS00 114 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 TRAV34A0A0B4J273 112 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 PTBP3O95758 552 aaKnown RBP6.94□□□□□ -1.3
HPS4-201ENST00000336873 PRDX2P32119 198 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 GFRA1P56159 465 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 DLX1P56177 255 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 RAB31Q13636 194 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 C16orf82Q7Z2V1 217 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 RPRMLQ8N4K4 120 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 BLNKQ8WV28 456 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 ITLN1Q8WWA0 313 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 TAF15Q92804 592 aaKnown RBP eCLIP6.94□□□□□ -1.3
HPS4-201ENST00000336873 DECR2Q9NUI1 292 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 TUBD1Q9UJT1 453 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 CARHSP1Q9Y2V2 147 aaKnown RBP6.94□□□□□ -1.3
HPS4-201ENST00000336873 POLQO75417 2590 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 ARHGAP32A7KAX9 2087 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 MARCH11A6NNE9 402 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 PITX3O75364 302 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 BCL2P10415 239 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 ERVFC1-1P60608 527 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 CLEC2AQ6UVW9 174 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 SMIM15Q7Z3B0 74 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 KIR3DL3Q8N743 410 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 LOXL4Q96JB6 756 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 C18orf12Q96KH6 178 aa6.94□□□□□ -1.3
HPS4-201ENST00000336873 TRBV6-7A0A0A0MS04 114 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 C17orf112F2Z3M2 114 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 H0Y980 276 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 REG1AP05451 166 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 CTSSP25774 331 aa6.93□□□□□ -1.3
HPS4-201ENST00000336873 PKIAP61925 76 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms