RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 ZNF474Q6S9Z5 364 aaPredicted RBP12.34□□□□□ -0.43
UBA1-201ENST00000335972 ZCCHC24Q8N2G6 241 aaKnown RBP12.34□□□□□ -0.43
UBA1-201ENST00000335972 OR10P1Q8NGE3 313 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 R3HDM4Q96D70 268 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 SPTA1P02549 2419 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 TRAV38-1A0A0B4J264 116 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 SPINT2O43291 252 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 IGHV2-5P01817 119 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 OPN1MWP04001 364 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 OPN1MW2P0DN77 364 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 OPN1MW3P0DN78 364 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 EIF4EBP1Q13541 118 aaPredicted RBP12.34□□□□□ -0.43
UBA1-201ENST00000335972 ITLN1Q8WWA0 313 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 AGMATQ9BSE5 352 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 BSNQ9UPA5 3926 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 MUC6Q6W4X9 2439 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 J3QW42 95 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 PPIHO43447 177 aaKnown RBP12.34□□□□□ -0.43
UBA1-201ENST00000335972 GCSAMQ8N6F7 178 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 OR4F5Q8NH21 305 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 Q8TCH9 128 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 OR4F4Q96R69 305 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 SMIM7Q9BQ49 75 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 PLSCR4Q9NRQ2 329 aa12.34□□□□□ -0.43
UBA1-201ENST00000335972 CISD1Q9NZ45 108 aaKnown RBP12.34□□□□□ -0.43
UBA1-201ENST00000335972 LINC00587B1AMM8 73 aa12.33□□□□□ -0.44
UBA1-201ENST00000335972 C15orf65H3BRN8 121 aa12.33□□□□□ -0.44
UBA1-201ENST00000335972 CD81P60033 236 aa12.33□□□□□ -0.44
UBA1-201ENST00000335972 HINT2Q9BX68 163 aa12.33□□□□□ -0.44
UBA1-201ENST00000335972 PATZ1Q9HBE1 687 aaKnown RBP12.33□□□□□ -0.44
UBA1-201ENST00000335972 DOK5Q9P104 306 aa12.33□□□□□ -0.44
UBA1-201ENST00000335972 PRAMEF5Q5TYX0 476 aa12.33□□□□□ -0.44
UBA1-201ENST00000335972 MBD3L1Q8WWY6 194 aa12.33□□□□□ -0.44
UBA1-201ENST00000335972 SMDT1Q9H4I9 107 aa12.33□□□□□ -0.44
UBA1-201ENST00000335972 TRBV23-1A0A0A0MS06 115 aa12.33□□□□□ -0.44
UBA1-201ENST00000335972 IFNA10P01566 189 aa12.33□□□□□ -0.44
UBA1-201ENST00000335972 KITLGP21583 273 aa12.33□□□□□ -0.44
UBA1-201ENST00000335972 FAM27E3Q08E93 113 aa12.33□□□□□ -0.44
UBA1-201ENST00000335972 ABHD12Q8N2K0 398 aa12.33□□□□□ -0.44
UBA1-201ENST00000335972 KDF1Q8NAX2 398 aaPredicted RBP12.33□□□□□ -0.44
UBA1-201ENST00000335972 PSMG3Q9BT73 122 aaPredicted RBP12.33□□□□□ -0.44
UBA1-201ENST00000335972 SLC25A15Q9Y619 301 aa12.33□□□□□ -0.44
UBA1-201ENST00000335972 IFITM10A6NMD0 228 aa12.32□□□□□ -0.44
UBA1-201ENST00000335972 PAGE4O60829 102 aa12.32□□□□□ -0.44
UBA1-201ENST00000335972 CLDN14O95500 239 aa12.32□□□□□ -0.44
UBA1-201ENST00000335972 P0C879 139 aa12.32□□□□□ -0.44
UBA1-201ENST00000335972 GNG10P50151 68 aa12.32□□□□□ -0.44
UBA1-201ENST00000335972 RAB24Q969Q5 203 aa12.32□□□□□ -0.44
UBA1-201ENST00000335972 VAX2Q9UIW0 290 aa12.32□□□□□ -0.44
UBA1-201ENST00000335972 PMS2P5A8MQ11 134 aa12.32□□□□□ -0.44
UBA1-201ENST00000335972 CGAP01215 116 aa12.32□□□□□ -0.44
UBA1-201ENST00000335972 DPPA3Q6W0C5 159 aa12.32□□□□□ -0.44
UBA1-201ENST00000335972 NPCDR1Q9BY65 106 aa12.32□□□□□ -0.44
UBA1-201ENST00000335972 METTL1Q9UBP6 276 aaKnown RBP12.32□□□□□ -0.44
UBA1-201ENST00000335972 TET2Q6N021 2002 aaPredicted RBP12.32□□□□□ -0.44
UBA1-201ENST00000335972 TRAV1-1A0A0B4J248 108 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 CYB5R3P00387 301 aaPredicted RBP12.31□□□□□ -0.44
UBA1-201ENST00000335972 SERF2P84101 59 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 SLC35E3Q7Z769 313 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 OR51G1Q8NGK1 321 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 TMEM147Q9BVK8 224 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 C1QTNF9BB2RNN3 333 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 RRHO14718 337 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 IGLV1-44P01699 117 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 FAM210BQ96KR6 192 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 ELOVL1Q9BW60 279 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 DUTP33316 252 aaKnown RBP12.31□□□□□ -0.44
UBA1-201ENST00000335972 MORN2Q502X0 79 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 MRGPRGQ86SM5 289 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 ZNF709Q8N972 641 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 MEGF10Q96KG7 1140 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 SDF2L1Q9HCN8 221 aa12.31□□□□□ -0.44
UBA1-201ENST00000335972 HEYLQ9NQ87 328 aaPredicted RBP12.31□□□□□ -0.44
UBA1-201ENST00000335972 ZNF318Q5VUA4 2279 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 HIST1H2BKO60814 126 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 HIST1H2BJP06899 126 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 HIST1H2BOP23527 126 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 HIST1H2BBP33778 126 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 HIST1H2BDP58876 126 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 HIST1H2BCP62807 126 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 HIST2H2BEQ16778 126 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.3□□□□□ -0.44
UBA1-201ENST00000335972 ZADH2Q8N4Q0 377 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 SNIP1Q8TAD8 396 aaKnown RBP12.3□□□□□ -0.44
UBA1-201ENST00000335972 FRZBQ92765 325 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 HIST1H2BHQ93079 126 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 HIST1H2BNQ99877 126 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 HIST1H2BMQ99879 126 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 MIOXQ9UGB7 285 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 FAM215AQ9Y5M1 114 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 C15orf62A8K5M9 175 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 HNF1AP20823 631 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 MEF2BQ02080 365 aaPredicted RBP12.3□□□□□ -0.44
UBA1-201ENST00000335972 GPR61Q9BZJ8 451 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 PGPEP1LA6NFU8 196 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 RAB29O14966 203 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 EIF2S3P41091 472 aaKnown RBP12.3□□□□□ -0.44
UBA1-201ENST00000335972 OR4A16Q8NH70 328 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 SSMEM1Q8WWF3 244 aa12.3□□□□□ -0.44
UBA1-201ENST00000335972 FAM122AQ96E09 287 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms