RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 PRELID3BQ9Y3B1 194 aa13.99□□□□□ -0.17
CHGA-202ENST00000334654 ARPC1BO15143 372 aaKnown RBP13.98□□□□□ -0.17
CHGA-202ENST00000334654 MOSP00540 346 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 APOA2P02652 100 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 FAM106CPP0CH98 169 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 SPNP16150 400 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 CATR1Q13166 79 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 HNF4GQ14541 408 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 TMEM177Q53S58 311 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 RBMS3Q6XE24 437 aaKnown RBP13.98□□□□□ -0.17
CHGA-202ENST00000334654 SLC25A42Q86VD7 318 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 TMEM219Q86XT9 240 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 SPAG16Q8N0X2 631 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 OR2T10Q8NGZ9 312 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 TP53RKQ96S44 253 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 CHIAQ9BZP6 476 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 C20orf85Q9H1P6 137 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 TNFRSF19Q9NS68 423 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 VPREB3Q9UKI3 123 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 NUBP2Q9Y5Y2 271 aa13.98□□□□□ -0.17
CHGA-202ENST00000334654 SRRM4A7MD48 611 aaKnown RBP13.97□□□□□ -0.17
CHGA-202ENST00000334654 RNF212BA8MTL3 300 aa13.97□□□□□ -0.17
CHGA-202ENST00000334654 CLDN34H7C241 214 aa13.97□□□□□ -0.17
CHGA-202ENST00000334654 H7C2Y5 167 aa13.97□□□□□ -0.17
CHGA-202ENST00000334654 RBFOX2O43251 390 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHGA-202ENST00000334654 RRASP10301 218 aa13.97□□□□□ -0.17
CHGA-202ENST00000334654 CNTFRP26992 372 aa13.97□□□□□ -0.17
CHGA-202ENST00000334654 F2RL1P55085 397 aa13.97□□□□□ -0.17
CHGA-202ENST00000334654 HES1Q14469 280 aa13.97□□□□□ -0.17
CHGA-202ENST00000334654 TMED4Q7Z7H5 227 aa13.97□□□□□ -0.17
CHGA-202ENST00000334654 CCDC71LQ8N9Z2 235 aa13.97□□□□□ -0.17
CHGA-202ENST00000334654 RBM14Q96PK6 669 aaKnown RBP13.97□□□□□ -0.17
CHGA-202ENST00000334654 NAA60Q9H7X0 242 aa13.97□□□□□ -0.17
CHGA-202ENST00000334654 PLXNB1O43157 2135 aa13.97□□□□□ -0.17
CHGA-202ENST00000334654 TNCP24821 2201 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 A0A0A6YYJ9 748 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 C3orf85A0A1B0GTC6 90 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 A0A1B0GVG6 124 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 CHST1O43916 411 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 CRYZL1O95825 349 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 IGLV2-23P01705 113 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 TMEM11P17152 192 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 AKR1C4P17516 323 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 S100GP29377 79 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 KIR2DS2P43631 304 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 MECP2P51608 486 aaKnown RBP13.96□□□□□ -0.17
CHGA-202ENST00000334654 RTL8BQ17RB0 113 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 SP6Q3SY56 376 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 TMEM128Q5BJH2 165 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 TCTEX1D1Q8N7M0 179 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 OR4C13Q8NGP0 309 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 FLYWCH2Q96CP2 140 aaKnown RBP13.96□□□□□ -0.17
CHGA-202ENST00000334654 GALNT14Q96FL9 552 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 RNF5Q99942 180 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 FAM212BQ9NTI7 297 aaPredicted RBP13.96□□□□□ -0.17
CHGA-202ENST00000334654 NUDT15Q9NV35 164 aa13.96□□□□□ -0.17
CHGA-202ENST00000334654 C2CD3Q4AC94 2353 aa13.95□□□□□ -0.18
CHGA-202ENST00000334654 TRAV6A0A075B6T7 132 aa13.95□□□□□ -0.18
CHGA-202ENST00000334654 H0Y980 276 aa13.95□□□□□ -0.18
CHGA-202ENST00000334654 IGKV1-39P01597 117 aa13.95□□□□□ -0.18
CHGA-202ENST00000334654 IGKV1D-39P04432 117 aa13.95□□□□□ -0.18
CHGA-202ENST00000334654 ANXA7P20073 488 aaKnown RBP13.95□□□□□ -0.18
CHGA-202ENST00000334654 DHRS7BQ6IAN0 325 aaPredicted RBP13.95□□□□□ -0.18
CHGA-202ENST00000334654 NPBQ8NG41 125 aa13.95□□□□□ -0.18
CHGA-202ENST00000334654 GLYATL2Q8WU03 294 aa13.95□□□□□ -0.18
CHGA-202ENST00000334654 CHAC2Q8WUX2 184 aa13.95□□□□□ -0.18
CHGA-202ENST00000334654 ALX4Q9H161 411 aaPredicted RBP13.95□□□□□ -0.18
CHGA-202ENST00000334654 LIN7CQ9NUP9 197 aaKnown RBP13.95□□□□□ -0.18
CHGA-202ENST00000334654 PITPNC1Q9UKF7 332 aa13.95□□□□□ -0.18
CHGA-202ENST00000334654 TEX13DA0A0J9YY54 714 aaPredicted RBP13.94□□□□□ -0.18
CHGA-202ENST00000334654 PEX14O75381 377 aa13.94□□□□□ -0.18
CHGA-202ENST00000334654 OR2F2O95006 317 aa13.94□□□□□ -0.18
CHGA-202ENST00000334654 DHFRP00374 187 aa13.94□□□□□ -0.18
CHGA-202ENST00000334654 AMY1AP04745 511 aa13.94□□□□□ -0.18
CHGA-202ENST00000334654 OR5AC1P0C628 307 aa13.94□□□□□ -0.18
CHGA-202ENST00000334654 UCP1P25874 307 aa13.94□□□□□ -0.18
CHGA-202ENST00000334654 LPAR6P43657 344 aa13.94□□□□□ -0.18
CHGA-202ENST00000334654 BCAP31P51572 246 aa13.94□□□□□ -0.18
CHGA-202ENST00000334654 RPS16P62249 146 aaKnown RBP13.94□□□□□ -0.18
CHGA-202ENST00000334654 UBA52P62987 128 aaKnown RBP13.94□□□□□ -0.18
CHGA-202ENST00000334654 PPP1R1AQ13522 171 aa13.94□□□□□ -0.18
CHGA-202ENST00000334654 OR4S2Q8NH73 311 aa13.94□□□□□ -0.18
CHGA-202ENST00000334654 OSR1Q8TAX0 266 aaPredicted RBP13.94□□□□□ -0.18
CHGA-202ENST00000334654 CD300LFQ8TDQ1 290 aa13.94□□□□□ -0.18
CHGA-202ENST00000334654 TMEM222Q9H0R3 208 aa13.94□□□□□ -0.18
CHGA-202ENST00000334654 BTBD17A6NE02 478 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 TCF21O43680 179 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 S1PR2O95136 353 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 NDUFA3O95167 84 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 HPRT1P00492 218 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 RNASE1P07998 156 aaKnown RBP13.93□□□□□ -0.18
CHGA-202ENST00000334654 H2AFB2P0C5Z0 115 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 UBE2MP61081 183 aaKnown RBP13.93□□□□□ -0.18
CHGA-202ENST00000334654 TMEM187Q14656 261 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 SGPP2Q8IWX5 399 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 Q8N9W7 124 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 LHFPL5Q8TAF8 219 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 SLC25A33Q9BSK2 321 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 PLEKHA2Q9HB19 425 aa13.93□□□□□ -0.18
CHGA-202ENST00000334654 BEX1Q9HBH7 125 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms