RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 C5orf66Q9H5L9 145 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 CLPSP04118 112 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 RUNX1Q01196 453 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 IZUMO4Q1ZYL8 232 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 RBM14Q96PK6 669 aaKnown RBP12.72□□□□□ -0.37
C9orf47-201ENST00000334490 QTRT1Q9BXR0 403 aaKnown RBP12.72□□□□□ -0.37
C9orf47-201ENST00000334490 RBKSQ9H477 322 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 MED13LQ71F56 2210 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 MPDZO75970 2070 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 CTXND1A0A1B0GTU2 59 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 HSBP1O75506 76 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 SCO1O75880 301 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 ANKRD55Q3KP44 614 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 RPL39P5Q59GN2 51 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 OR13A1Q8NGR1 328 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 PLSCR4Q9NRQ2 329 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 NAT8BQ9UHF3 227 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 RANP62826 216 aaKnown RBP12.71□□□□□ -0.37
C9orf47-201ENST00000334490 LGALSLQ3ZCW2 172 aaPredicted RBP12.71□□□□□ -0.37
C9orf47-201ENST00000334490 SIGLECL1Q8N7X8 197 aa12.71□□□□□ -0.37
C9orf47-201ENST00000334490 WDR81Q562E7 1941 aa12.71□□□□□ -0.37
C9orf47-201ENST00000334490 PLXNA3P51805 1871 aa12.71□□□□□ -0.37
C9orf47-201ENST00000334490 LYNX1G3V0Z9 82 aa12.71□□□□□ -0.37
C9orf47-201ENST00000334490 LINC00869P0C866 280 aa12.71□□□□□ -0.37
C9orf47-201ENST00000334490 LYNX1P0DP58 116 aa12.71□□□□□ -0.37
C9orf47-201ENST00000334490 TPPP2P59282 170 aa12.71□□□□□ -0.37
C9orf47-201ENST00000334490 SELENOTP62341 195 aa12.71□□□□□ -0.37
C9orf47-201ENST00000334490 PLA2G2CQ5R387 149 aa12.71□□□□□ -0.37
C9orf47-201ENST00000334490 SOSTQ9BQB4 213 aa12.71□□□□□ -0.37
C9orf47-201ENST00000334490 OR5AC2Q9NZP5 309 aa12.71□□□□□ -0.37
C9orf47-201ENST00000334490 TNFSF18Q9UNG2 199 aa12.71□□□□□ -0.37
C9orf47-201ENST00000334490 CUL9Q8IWT3 2517 aa12.71□□□□□ -0.37
C9orf47-201ENST00000334490 IL18BPO95998 194 aa12.71□□□□□ -0.38
C9orf47-201ENST00000334490 ORM1P02763 201 aa12.71□□□□□ -0.38
C9orf47-201ENST00000334490 ID1P41134 155 aa12.71□□□□□ -0.38
C9orf47-201ENST00000334490 FXYD3Q14802 87 aa12.71□□□□□ -0.38
C9orf47-201ENST00000334490 GUCA2BQ16661 112 aa12.71□□□□□ -0.38
C9orf47-201ENST00000334490 CENPVQ7Z7K6 275 aaPredicted RBP12.71□□□□□ -0.38
C9orf47-201ENST00000334490 SELENOHQ8IZQ5 122 aaKnown RBP12.71□□□□□ -0.38
C9orf47-201ENST00000334490 FAM216AQ8WUB2 273 aa12.71□□□□□ -0.38
C9orf47-201ENST00000334490 ACACBO00763 2458 aa12.71□□□□□ -0.38
C9orf47-201ENST00000334490 SEC11BP0C7V7 166 aa12.71□□□□□ -0.38
C9orf47-201ENST00000334490 CAMPP49913 170 aa12.71□□□□□ -0.38
C9orf47-201ENST00000334490 IL36RNQ9UBH0 155 aa12.71□□□□□ -0.38
C9orf47-201ENST00000334490 TCF19Q9Y242 345 aa12.71□□□□□ -0.38
C9orf47-201ENST00000334490 RPS11P62280 158 aaKnown RBP eCLIP12.7□□□□□ -0.38
C9orf47-201ENST00000334490 FA2HQ7L5A8 372 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 C9orf62Q8N4C0 152 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 TM2D1Q9BX74 207 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 PXMP4Q9Y6I8 212 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 FER1L5A0AVI2 2057 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 TM4SF5O14894 197 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 CXorf1O96002 111 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 REG1AP05451 166 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 MMP9P14780 707 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 COL8A1P27658 744 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 KHDC3LQ587J8 217 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 ZNF586Q9NXT0 402 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 VAX2Q9UIW0 290 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 PITX3O75364 302 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 HIST1H1EP10412 219 aaKnown RBP12.7□□□□□ -0.38
C9orf47-201ENST00000334490 MFAP4P55083 255 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 BSXQ3C1V8 233 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 TMEM37Q8WXS4 190 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 PAXXQ9BUH6 204 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 DOCK9Q9BZ29 2069 aa12.7□□□□□ -0.38
C9orf47-201ENST00000334490 PQLC2LA1A4F0 135 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 PLAUP00749 431 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 RBPMS2Q6ZRY4 209 aaKnown RBP12.69□□□□□ -0.38
C9orf47-201ENST00000334490 LY6G6EA0A0G2JKS1 128 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 UCP3P55916 312 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 SUMO1P63165 101 aaKnown RBP12.69□□□□□ -0.38
C9orf47-201ENST00000334490 LSM10Q969L4 123 aaKnown RBP12.69□□□□□ -0.38
C9orf47-201ENST00000334490 TOLLIPQ9H0E2 274 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 U3KQA8 63 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 KBTBD11-OT1A0A1B0GTJ5 212 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 PGA5P0DJD9 388 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 RD3LP0DJH9 198 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 COMPP49747 757 aaPredicted RBP12.69□□□□□ -0.38
C9orf47-201ENST00000334490 ZNF319Q9P2F9 582 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 UFC1Q9Y3C8 167 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 TRAPPC1Q9Y5R8 145 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 TICRRQ7Z2Z1 1910 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 DEDDO75618 318 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 CD74P04233 296 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 RPL30P62888 115 aaKnown RBP12.69□□□□□ -0.38
C9orf47-201ENST00000334490 NHLH1Q02575 133 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 MEF2CQ06413 473 aaPredicted RBP12.69□□□□□ -0.38
C9orf47-201ENST00000334490 TNFRSF9Q07011 255 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 C5orf17Q8NAS9 161 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 WFIKKN1Q96NZ8 548 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 METTL26Q96S19 204 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 RSG1Q9BU20 258 aa12.69□□□□□ -0.38
C9orf47-201ENST00000334490 PTPRQQ9UMZ3 2332 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 A0A1W2PS18 150 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 FAM90A1Q86YD7 464 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 OR10C1Q96KK4 312 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 FAM90A26D6RGX4 464 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 SERF2P84101 59 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 A0A0G2JK05 382 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms