RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ZNF596Q8TC21 504 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 ZNF48Q96MX3 618 aaPredicted RBP13.34□□□□□ -0.27
SHOX-201ENST00000334060 NIPBLQ6KC79 2804 aaeCLIP13.34□□□□□ -0.27
SHOX-201ENST00000334060 hCG_1809904A0A1W2PP81 198 aa13.33□□□□□ -0.28
SHOX-201ENST00000334060 A0A1W2PPE2 198 aa13.33□□□□□ -0.28
SHOX-201ENST00000334060 A0A1W2PR64 198 aa13.33□□□□□ -0.28
SHOX-201ENST00000334060 A0A1W2PRV1 198 aa13.33□□□□□ -0.28
SHOX-201ENST00000334060 DISC1C4P0D8 188 aa13.33□□□□□ -0.28
SHOX-201ENST00000334060 FOSL1P15407 271 aa13.33□□□□□ -0.28
SHOX-201ENST00000334060 LUMP51884 338 aaPredicted RBP13.33□□□□□ -0.28
SHOX-201ENST00000334060 C20orf85Q9H1P6 137 aa13.33□□□□□ -0.28
SHOX-201ENST00000334060 BIN3Q9NQY0 253 aa13.33□□□□□ -0.28
SHOX-201ENST00000334060 SLC2A8Q9NY64 477 aa13.33□□□□□ -0.28
SHOX-201ENST00000334060 F8W036 122 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 ANXA7P20073 488 aaKnown RBP13.32□□□□□ -0.28
SHOX-201ENST00000334060 EPHA1P21709 976 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 GATA3P23771 443 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 HERV-K104P61576 105 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 EIF4EBP1Q13541 118 aaPredicted RBP13.32□□□□□ -0.28
SHOX-201ENST00000334060 RITA1Q96K30 269 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 PCP4L1A6NKN8 68 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 G3V3Q6 166 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 DNASE2O00115 360 aaPredicted RBP13.32□□□□□ -0.28
SHOX-201ENST00000334060 ARPC1BO15143 372 aaKnown RBP13.32□□□□□ -0.28
SHOX-201ENST00000334060 CREBL2O60519 120 aaPredicted RBP13.32□□□□□ -0.28
SHOX-201ENST00000334060 DIRAS3O95661 229 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 RLN1P04808 185 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 PGAM2P15259 253 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 GPR12P47775 334 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 GPR157Q5UAW9 335 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 TMED4Q7Z7H5 227 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 LINC00311Q8N616 119 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 ZNF383Q8NA42 475 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 BEND2Q8NDZ0 799 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 MBD2Q9UBB5 411 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 GPR132Q9UNW8 380 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 NF1P21359 2839 aa13.32□□□□□ -0.28
SHOX-201ENST00000334060 A0A1W2PPI3 338 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 J3QLI3 93 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 M0R1X1 148 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 NDUFB6O95139 128 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 CT45A6P0DMU7 189 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 CT45A5P0DMU8 189 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 CT45A7P0DMV0 189 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 VSIG10L2P0DP72 767 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 TPTE2P1Q5T6R2 138 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 NCR3LG1Q68D85 454 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 ZNF645Q8N7E2 425 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 OR51H1Q8NH63 302 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 TAF15Q92804 592 aaKnown RBP eCLIP13.31□□□□□ -0.28
SHOX-201ENST00000334060 SNAPINO95295 136 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 DEFB112Q30KQ8 113 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 SP6Q3SY56 376 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 LIN54Q6MZP7 749 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 ZNF833PQ6ZTB9 187 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 RTN4IP1Q8WWV3 396 aaPredicted RBP13.31□□□□□ -0.28
SHOX-201ENST00000334060 DUX5Q96PT3 197 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 PRRT1Q99946 306 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 RSRP1Q9BUV0 290 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 SLC2A9Q9NRM0 540 aa13.31□□□□□ -0.28
SHOX-201ENST00000334060 NUDT19A8MXV4 375 aa13.3□□□□□ -0.28
SHOX-201ENST00000334060 RAMP3O60896 148 aa13.3□□□□□ -0.28
SHOX-201ENST00000334060 HTR1DP28221 377 aa13.3□□□□□ -0.28
SHOX-201ENST00000334060 SRSF2Q01130 221 aaKnown RBP13.3□□□□□ -0.28
SHOX-201ENST00000334060 OR52B4Q8NGK2 314 aa13.3□□□□□ -0.28
SHOX-201ENST00000334060 EDARADDQ8WWZ3 215 aa13.3□□□□□ -0.28
SHOX-201ENST00000334060 MGAT4CQ9UBM8 478 aa13.3□□□□□ -0.28
SHOX-201ENST00000334060 TIMM23O14925 209 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 PGLYRP1O75594 196 aaPredicted RBP13.29□□□□□ -0.28
SHOX-201ENST00000334060 FAUP35544 74 aaKnown RBP13.29□□□□□ -0.28
SHOX-201ENST00000334060 PRRX1P54821 245 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 PIGPP57054 158 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 UBE2MP61081 183 aaKnown RBP13.29□□□□□ -0.28
SHOX-201ENST00000334060 UBA52P62987 128 aaKnown RBP13.29□□□□□ -0.28
SHOX-201ENST00000334060 SUPT4H1P63272 117 aaKnown RBP13.29□□□□□ -0.28
SHOX-201ENST00000334060 GSG1LQ6UXU4 331 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 TMUB2Q71RG4 321 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 C12orf57Q99622 126 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 TNFRSF19Q9NS68 423 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 DPM3Q9P2X0 92 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 MLXQ9UH92 298 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 IGHV1-3A0A0C4DH29 117 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 RAB29O14966 203 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 IGKV1-16P04430 117 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 AKR1C4P17516 323 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 CXCL2P19875 107 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 DUTP33316 252 aaKnown RBP13.29□□□□□ -0.28
SHOX-201ENST00000334060 LY6G6FQ5SQ64 297 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 TBC1D26Q86UD7 250 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 C8orf31Q8N9H6 132 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 NANPQ8TBE9 248 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 CFHR4Q92496 578 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 PHYHIPLQ96FC7 376 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 TP53RKQ96S44 253 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 NABP2Q9BQ15 211 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 NKX6-2Q9C056 277 aaPredicted RBP13.29□□□□□ -0.28
SHOX-201ENST00000334060 SAV1Q9H4B6 383 aaPredicted RBP13.29□□□□□ -0.28
SHOX-201ENST00000334060 RAB9BQ9NP90 201 aa13.29□□□□□ -0.28
SHOX-201ENST00000334060 S100A6P06703 90 aa13.28□□□□□ -0.28
SHOX-201ENST00000334060 CNTFRP26992 372 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms