RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 C1orf210Q8IVY1 113 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 TMEM105Q8N8V8 129 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 CLEC18CQ8NCF0 446 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 ABHD3Q8WU67 409 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 GNB4Q9HAV0 340 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 NRN1Q9NPD7 142 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 IGHV3-43A0A0B4J1X8 118 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 CXCL13O43927 109 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 IGHV3-43DP0DP04 118 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 F2RP25116 425 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 LYSMD4Q5XG99 296 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 TMEM144Q7Z5S9 345 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 CXorf67Q86X51 503 aaPredicted RBP9.37□□□□□ -0.91
CCDC87-201ENST00000333861 NFAM1Q8NET5 270 aaPredicted RBP9.37□□□□□ -0.91
CCDC87-201ENST00000333861 OR1F12Q8NHA8 337 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 SFRP2Q96HF1 295 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 RPH3ALQ9UNE2 315 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 COX11Q9Y6N1 276 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 SVEP1Q4LDE5 3571 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 M0R296 226 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 CA6P23280 308 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 NXPH1P58417 271 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 PTRH2Q9Y3E5 179 aaKnown RBP9.36□□□□□ -0.91
CCDC87-201ENST00000333861 DMXL1Q9Y485 3027 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 CUL9Q8IWT3 2517 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 MDFIC2A0A1B0GVS7 189 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 TMEM250H0YL14 139 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 ZG16O60844 167 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 CBR3O75828 277 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 IGLV3-1P01715 115 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 OTX1P32242 354 aaPredicted RBP9.36□□□□□ -0.91
CCDC87-201ENST00000333861 GFRA1P56159 465 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 UBE2NP61088 152 aaKnown RBP9.36□□□□□ -0.91
CCDC87-201ENST00000333861 HBG1P69891 147 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 HBG2P69892 147 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 HES3Q5TGS1 186 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 S100A7AQ86SG5 101 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 C1orf174Q8IYL3 243 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 ZNF738Q8NE65 137 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 OCC1Q8TAD7 63 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 UQCR10Q9UDW1 63 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 ABCA1O95477 2261 aa9.36□□□□□ -0.91
CCDC87-201ENST00000333861 SCO2A0A1W2PP80 73 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 ZNF503-AS2A6NEH8 195 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 PATE3B3GLJ2 98 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 F6UZH7 168 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 RFPL3SP0C7P2 107 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 RANP62826 216 aaKnown RBP9.35□□□□□ -0.91
CCDC87-201ENST00000333861 SERF2P84101 59 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 ZNF596Q8TC21 504 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 RAB40CQ96S21 281 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 ZPBPQ9BS86 351 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 SLC45A2Q9UMX9 530 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 TACC2O95359 2948 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 YLPM1P49750 1951 aaKnown RBP9.35□□□□□ -0.91
CCDC87-201ENST00000333861 ROS1P08922 2347 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 A0A0U1RQV5 110 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 C5orf49A4QMS7 147 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 A8MXE2 369 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 CTRLP40313 264 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 FASLGP48023 281 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 LCN2P80188 198 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 CNN3Q15417 329 aaKnown RBP9.35□□□□□ -0.91
CCDC87-201ENST00000333861 HIST3H3Q16695 136 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 ORAOV1Q8WV07 137 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 REPIN1Q9BWE0 567 aaKnown RBP9.35□□□□□ -0.91
CCDC87-201ENST00000333861 CEP192Q8TEP8 1941 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 SYNGR3O43761 229 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 GPX1P07203 203 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 C3orf79P0CE67 100 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 FXYD3Q14802 87 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 C3AR1Q16581 482 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 VKORC1L1Q8N0U8 176 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 OR8I2Q8N0Y5 310 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 RFESDQ8TAC1 157 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 FAM122AQ96E09 287 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 PSMG3Q9BT73 122 aaPredicted RBP9.35□□□□□ -0.91
CCDC87-201ENST00000333861 PRRG4Q9BZD6 226 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 PLSCR2Q9NRY7 297 aa9.35□□□□□ -0.91
CCDC87-201ENST00000333861 TIMM8BQ9Y5J9 83 aaPredicted RBP9.35□□□□□ -0.91
CCDC87-201ENST00000333861 CTXND1A0A1B0GTU2 59 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 BLACEA4D250 179 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 MLNRO43193 412 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 SCRG1O75711 98 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 PIAS2O75928 621 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 TSPOP30536 169 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 PAFAH1B2P68402 229 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 PSG7Q13046 419 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 PRDX4Q13162 271 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 Q56UQ5 140 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 NUDT10Q8NFP7 164 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 ZNF586Q9NXT0 402 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 H0Y980 276 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 ZNF83P51522 516 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 WIPI1Q5MNZ9 446 aaPredicted RBP9.34□□□□□ -0.91
CCDC87-201ENST00000333861 TMEM211Q6ICI0 200 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 PCSK4Q6UW60 755 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 NHLRC2Q8NBF2 726 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 OR4B1Q8NGF8 309 aa9.34□□□□□ -0.91
CCDC87-201ENST00000333861 APOBEC3DQ96AK3 386 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms