RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 TDGF1P13385 188 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 CD24P25063 80 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 LSM10Q969L4 123 aaKnown RBP9.1□□□□□ -0.95
CLN8-201ENST00000331222 HSPB9Q9BQS6 159 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 SIPA1L3O60292 1781 aaPredicted RBP9.1□□□□□ -0.95
CLN8-201ENST00000331222 MFAP4P55083 255 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 FAM159AQ6UWV7 190 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 IGHV1-69-2A0A0G2JMI3 117 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 IGHV3-11P01762 117 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 BGLAPP02818 100 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 STAG3L2P0CL84 134 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 ATP6V0CP27449 155 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 UCNP55089 124 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 RPL8P62917 257 aaKnown RBP9.1□□□□□ -0.95
CLN8-201ENST00000331222 CIRBPQ14011 172 aaKnown RBP9.1□□□□□ -0.95
CLN8-201ENST00000331222 DEGS2Q6QHC5 323 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 SHISA5Q8N114 240 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 IL19Q9UHD0 177 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 KLK2P20151 261 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 ZNRF1Q8ND25 227 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 MRPL30Q8TCC3 161 aaKnown RBP9.1□□□□□ -0.95
CLN8-201ENST00000331222 DNASE2BQ8WZ79 361 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 NPVFQ9HCQ7 196 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 IDI2-AS1Q9NZ38 188 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 FOXJ2Q9P0K8 574 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 SOX21Q9Y651 276 aaPredicted RBP9.1□□□□□ -0.95
CLN8-201ENST00000331222 TRAV12-3A0A0B4J271 114 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 A0A1W2PPV9 198 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 RBFOX2O43251 390 aaKnown RBP eCLIP9.1□□□□□ -0.955e-6■■□□□ 13.2
CLN8-201ENST00000331222 TMEM170BQ5T4T1 132 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 CYB561D1Q8N8Q1 229 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 LINC01587Q99440 93 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 SPTA1P02549 2419 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 PSME4Q14997 1843 aa9.1□□□□□ -0.95
CLN8-201ENST00000331222 SPTBN1Q01082 2364 aaKnown RBP9.1□□□□□ -0.95
CLN8-201ENST00000331222 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.09□□□□□ -0.95
CLN8-201ENST00000331222 MALP21145 153 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 HOXC8P31273 242 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 SMAGPQ0VAQ4 97 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 ST6GALNAC3Q8NDV1 305 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 LOC101059948A0A1B0GTJ6 334 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 SRXN1Q9BYN0 137 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 MAP1LC3AQ9H492 121 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 OR5AC2Q9NZP5 309 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 PTPRFP10586 1907 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 BIVMQ86UB2 503 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 NFAM1Q8NET5 270 aaPredicted RBP9.09□□□□□ -0.95
CLN8-201ENST00000331222 FREM3P0C091 2139 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 CNOT1A5YKK6 2376 aaKnown RBP9.09□□□□□ -0.95
CLN8-201ENST00000331222 SNAI2O43623 268 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 DNAL4O96015 105 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 MPV17P39210 176 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 NPBWR2P48146 333 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 PCSK4Q6UW60 755 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 GOLT1AQ6ZVE7 132 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 LINC00470Q9BZP3 86 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 ELF5Q9UKW6 265 aaPredicted RBP9.09□□□□□ -0.95
CLN8-201ENST00000331222 TMEM218A2RU14 115 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 PRR33A8MZF0 331 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 COX6CP09669 75 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 CEACAM21Q3KPI0 293 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 ANGPTL4Q9BY76 406 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 SIAH2O43255 324 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 HPRT1P00492 218 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 EEF1AKMT3Q96AZ1 226 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 TMEM101Q96IK0 257 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 TMEM74BQ9NUR3 256 aa9.09□□□□□ -0.95
CLN8-201ENST00000331222 SDK2Q58EX2 2172 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 VSIG8P0DPA2 414 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 UNC119Q13432 240 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 CEACAM4O75871 244 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 CDKN1AP38936 164 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 C1orf162Q8NEQ5 155 aaPredicted RBP9.08□□□□□ -0.96
CLN8-201ENST00000331222 RARRES2Q99969 163 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 SH3BGRL3Q9H299 93 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 EPOPA6NHQ4 379 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 C17orf51A8MQB3 221 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 RIPPLY3P57055 190 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 FAM27E3Q08E93 113 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 ZNF415Q09FC8 603 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 SCNM1Q9BWG6 230 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 A0A1W2PQF6 199 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 C1QL1O75973 258 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 CRYBA2P53672 197 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 CLEC19AQ6UXS0 136 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 OR4D5Q8NGN0 318 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 MIOXQ9UGB7 285 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 KCNK7Q9Y2U2 307 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 IGKV1D-33P01593 117 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 IGKV1-33P01594 117 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 NPPCP23582 126 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 TMEM95Q3KNT9 176 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 CHST5Q9GZS9 411 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 TRGV2A0A075B6R0 118 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 CRHP06850 196 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 GLIPR1P48060 266 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 MMP16P51512 607 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 SLC25A45Q8N413 288 aa9.08□□□□□ -0.96
CLN8-201ENST00000331222 KLF14Q8TD94 323 aaPredicted RBP9.08□□□□□ -0.96
CLN8-201ENST00000331222 SCN5AQ14524 2016 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms