RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ONECUT1Q9UBC0 465 aa15.33■□□□□ 0.04
EXOSC3-201ENST00000327304 CREBBPQ92793 2442 aa15.32■□□□□ 0.04
EXOSC3-201ENST00000327304 IGHV2-70DA0A0C4DH43 119 aa15.32■□□□□ 0.04
EXOSC3-201ENST00000327304 A0A0G2JRQ6 117 aa15.32■□□□□ 0.04
EXOSC3-201ENST00000327304 C17orf98A8MV24 154 aa15.32■□□□□ 0.04
EXOSC3-201ENST00000327304 ENSAO43768 121 aaKnown RBP15.32■□□□□ 0.04
EXOSC3-201ENST00000327304 GPR137BO60478 399 aa15.32■□□□□ 0.04
EXOSC3-201ENST00000327304 IGKV1-5P01602 117 aa15.32■□□□□ 0.04
EXOSC3-201ENST00000327304 LPAR6P43657 344 aa15.32■□□□□ 0.04
EXOSC3-201ENST00000327304 AKR1C2P52895 323 aa15.32■□□□□ 0.04
EXOSC3-201ENST00000327304 Q3ZCU0 254 aa15.32■□□□□ 0.04
EXOSC3-201ENST00000327304 HEPN1Q6WQI6 88 aa15.32■□□□□ 0.04
EXOSC3-201ENST00000327304 TCTEX1D2Q8WW35 142 aa15.32■□□□□ 0.04
EXOSC3-201ENST00000327304 NFYBP25208 207 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 EIF5AP63241 154 aaKnown RBP15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 CD300LFQ8TDQ1 290 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 LEAP2Q969E1 77 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 ABHD14AQ9BUJ0 271 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 SLC25A32Q9H2D1 315 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 IFI27L2Q9H2X8 130 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 POLR3KQ9Y2Y1 108 aaPredicted RBP15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 MMP24Q9Y5R2 645 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 AUP1Q9Y679 476 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 A0A1W2PPH5 198 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 IGHV3-7P01780 117 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 ZNF134P52741 427 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 DLX1P56177 255 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 ARF6P62330 175 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 CXorf66Q5JRM2 361 aaPredicted RBP15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 BTNL3Q6UXE8 466 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 BAP18Q8IXM2 172 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 SPAG16Q8N0X2 631 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 COA4Q9NYJ1 87 aa15.31■□□□□ 0.04
EXOSC3-201ENST00000327304 CR1P17927 2039 aa15.3■□□□□ 0.04
EXOSC3-201ENST00000327304 DUTP33316 252 aaKnown RBP15.3■□□□□ 0.04
EXOSC3-201ENST00000327304 BRWD1-AS2P59051 145 aa15.3■□□□□ 0.04
EXOSC3-201ENST00000327304 POLR2GP62487 172 aaKnown RBP eCLIP15.3■□□□□ 0.04
EXOSC3-201ENST00000327304 PRB3Q04118 309 aaPredicted RBP15.3■□□□□ 0.04
EXOSC3-201ENST00000327304 Q8N7P7 452 aa15.3■□□□□ 0.04
EXOSC3-201ENST00000327304 ZNF439Q8NDP4 499 aa15.3■□□□□ 0.04
EXOSC3-201ENST00000327304 C1orf159Q96HA4 380 aa15.3■□□□□ 0.04
EXOSC3-201ENST00000327304 FAM210AQ96ND0 272 aa15.3■□□□□ 0.04
EXOSC3-201ENST00000327304 WNK2Q9Y3S1 2297 aa15.3■□□□□ 0.04
EXOSC3-201ENST00000327304 LINC00473A8K010 186 aa15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 RAMP3O60896 148 aa15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 PROP1O75360 226 aa15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 GAPDHP04406 335 aaKnown RBP15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 NMBP08949 121 aa15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 IGHV1-8P0DP01 117 aa15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 CT45A1Q5HYN5 189 aa15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 CT45A3Q8NHU0 189 aa15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 MYO9AB2RTY4 2548 aa15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 EPHA1P21709 976 aa15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 VAMP2P63027 116 aa15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 Q6ZRM9 215 aa15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 OR2C3Q8N628 320 aa15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 CACNG5Q9UF02 275 aa15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 SESN1Q9Y6P5 492 aa15.29■□□□□ 0.04
EXOSC3-201ENST00000327304 ZANQ9Y493 2812 aa15.28■□□□□ 0.04
EXOSC3-201ENST00000327304 FAM90A26D6RGX4 464 aa15.28■□□□□ 0.04
EXOSC3-201ENST00000327304 M0R1W7 72 aa15.28■□□□□ 0.04
EXOSC3-201ENST00000327304 WRBO00258 174 aa15.28■□□□□ 0.04
EXOSC3-201ENST00000327304 RAB29O14966 203 aa15.28■□□□□ 0.04
EXOSC3-201ENST00000327304 RBFOX2O43251 390 aaKnown RBP eCLIP15.28■□□□□ 0.04
EXOSC3-201ENST00000327304 RBP4P02753 201 aa15.28■□□□□ 0.04
EXOSC3-201ENST00000327304 MSMBP08118 114 aa15.28■□□□□ 0.04
EXOSC3-201ENST00000327304 P0C879 139 aa15.28■□□□□ 0.04
EXOSC3-201ENST00000327304 KIR3DL3Q8N743 410 aa15.28■□□□□ 0.04
EXOSC3-201ENST00000327304 LYRM2Q9NU23 88 aaPredicted RBP15.28■□□□□ 0.04
EXOSC3-201ENST00000327304 MED9Q9NWA0 146 aa15.28■□□□□ 0.04
EXOSC3-201ENST00000327304 FBXL17Q9UF56 701 aa15.28■□□□□ 0.04
EXOSC3-201ENST00000327304 B4DSR2 109 aa15.27■□□□□ 0.04
EXOSC3-201ENST00000327304 SLC31A2O15432 143 aa15.27■□□□□ 0.04
EXOSC3-201ENST00000327304 SSSCA1O60232 199 aa15.27■□□□□ 0.04
EXOSC3-201ENST00000327304 JTBO76095 146 aa15.27■□□□□ 0.04
EXOSC3-201ENST00000327304 KIR2DS2P43631 304 aa15.27■□□□□ 0.04
EXOSC3-201ENST00000327304 DVL1P1P54792 670 aaPredicted RBP15.27■□□□□ 0.04
EXOSC3-201ENST00000327304 ZNF816Q0VGE8 651 aaPredicted RBP15.27■□□□□ 0.04
EXOSC3-201ENST00000327304 CIARTQ8N365 385 aaPredicted RBP15.27■□□□□ 0.04
EXOSC3-201ENST00000327304 RAB40CQ96S21 281 aa15.27■□□□□ 0.04
EXOSC3-201ENST00000327304 SLC25A31Q9H0C2 315 aa15.27■□□□□ 0.04
EXOSC3-201ENST00000327304 INSIG2Q9Y5U4 225 aa15.27■□□□□ 0.04
EXOSC3-201ENST00000327304 FLNAP21333 2647 aaKnown RBP15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 A0A1W2PPE3 182 aa15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 M0R1X1 148 aa15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 S1PR2O95136 353 aa15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 GNG10P50151 68 aa15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 TMEM249Q2WGJ8 235 aa15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 OR2B11Q5JQS5 317 aa15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 NCR3LG1Q68D85 454 aa15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 SLC25A48Q6ZT89 311 aaKnown RBP15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 PDZD9Q8IXQ8 264 aa15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 LINC01356Q8N9X3 169 aa15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 LRRC20Q8TCA0 184 aa15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 PCNPQ8WW12 178 aaKnown RBP15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 MAGT1Q9H0U3 335 aa15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 SIRPDQ9H106 197 aa15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 TMEM133Q9H2Q1 129 aa15.27■□□□□ 0.03
EXOSC3-201ENST00000327304 SIRT7Q9NRC8 400 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms