RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 IGKV1-39P01597 117 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 IGKV1D-39P04432 117 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 IGHV4-38-2P0DP08 117 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 CXCL3P19876 107 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 RAB13P51153 203 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 CCDC144NLQ6NUI1 221 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 PDPNQ86YL7 162 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 OR5M8Q8NGP6 311 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 AJUBAQ96IF1 538 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 CCSO14618 274 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 ADAP1O75689 374 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 ATG12O94817 140 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 HPRT1P00492 218 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 HOXB5P09067 269 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 MC5RP33032 325 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 KLF17Q5JT82 389 aaPredicted RBP8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 LYZL2Q7Z4W2 148 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 AKAP14Q86UN6 197 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 PIP4P2Q8N4L2 257 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 MALSU1Q96EH3 234 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 WASHC3Q9Y3C0 194 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 TMED3Q9Y3Q3 217 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 HILPDAQ9Y5L2 63 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 CRYZL1O95825 349 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 IFNA21P01568 189 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 KRTAP1-1Q07627 177 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 HABP2Q14520 560 aaPredicted RBP8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 GGNBP1Q5YKI7 109 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 RUSC1-AS1Q66K80 236 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 MOB3BQ86TA1 216 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 C17orf50Q8WW18 174 aa8.27□□□□□ -1.09
VIPAS39-201ENST00000327028 IGHV3OR16-10A0A075B7F0 116 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 CD5LO43866 347 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 FSHBP01225 129 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 VDAC1P21796 283 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 NMSQ5H8A3 153 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 GSG1LQ6UXU4 331 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 DYNAPQ8N1N2 210 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 LSM10Q969L4 123 aaKnown RBP8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 ZNF436Q9C0F3 470 aaPredicted RBP8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 H7C2Y5 167 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 TIMM23O14925 209 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 CCNKO75909 580 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 SIX6O95475 246 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 IGKV1-5P01602 117 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 GIPP09681 153 aaPredicted RBP8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 AKR1C2P52895 323 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 H2BFSP57053 126 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 BPIFB3P59826 476 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 SSX2Q16385 188 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 TMEM177Q53S58 311 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 ASB13Q8WXK3 278 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 CFHR4Q92496 578 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 R3HDM4Q96D70 268 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 SEC22AQ96IW7 307 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 NEURL2Q9BR09 285 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 OTOGQ6ZRI0 2925 aa8.26□□□□□ -1.09
VIPAS39-201ENST00000327028 FAM25EA8MYX2 175 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 PFDN1O60925 122 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 OR2A4O95047 310 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 IGKV1-16P04430 117 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 P0C879 139 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 NQO2P16083 231 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 CD1BP29016 333 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 ARHGDIBP52566 201 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 CD83Q01151 205 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 SRSF4Q08170 494 aaKnown RBP8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 BRD3OSQ6XYD6 125 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 FAM219AQ8IW50 185 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 OR4C13Q8NGP0 309 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 RNASE11Q8TAA1 199 aaKnown RBP8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 OSR1Q8TAX0 266 aaPredicted RBP8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 ST6GAL2Q96JF0 529 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 OR2A7Q96R45 310 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 TEX15Q9BXT5 2789 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 IGHV3-72A0A0B4J1Y9 119 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 C5orf51A6NDU8 294 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 MARCH11A6NNE9 402 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 MPTX1A8MV57 137 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 G6PCP35575 357 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 ERVK-16P61578 105 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 POU2AF1Q16633 256 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 TEX29Q8N6K0 151 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 FLYWCH2Q96CP2 140 aaKnown RBP8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 RRNAD1Q96FB5 475 aaKnown RBP8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 OR10C1Q96KK4 312 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 SPIN2AQ99865 258 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 SPIN2BQ9BPZ2 258 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 MMP24Q9Y5R2 645 aa8.25□□□□□ -1.09
VIPAS39-201ENST00000327028 A0A0G2JRQ6 117 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 C13orf42A0A1B0GVH6 325 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 VENTXO95231 258 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 HRASP01112 189 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 KRASP01116 189 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 SLC25A6P12236 298 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 IAH1Q2TAA2 248 aaPredicted RBP8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 NANPQ8TBE9 248 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 C2orf50Q96LR7 162 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 AIFM2Q9BRQ8 373 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 PDCD10Q9BUL8 212 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms