RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 C1QL1O75973 258 aa21.58■■□□□ 1.05
TM6SF1-202ENST00000322019 SPINK9Q5DT21 86 aa21.58■■□□□ 1.05
TM6SF1-202ENST00000322019 REG1BP48304 166 aa21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 TMEM267Q0VDI3 215 aaPredicted RBP21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 SUN5Q8TC36 379 aa21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 PRELID3BQ9Y3B1 194 aa21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 KRBOX1C9JBD0 128 aa21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 FBXO24O75426 580 aa21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 OR9G9P0C7N8 305 aa21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 OR2B8PP59922 312 aa21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 TMEM30BQ3MIR4 351 aa21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 OR10A7Q8NGE5 316 aa21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 OR1S2Q8NGQ3 325 aa21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 CD300LFQ8TDQ1 290 aa21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 FAM212BQ9NTI7 297 aaPredicted RBP21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 GAB2Q9UQC2 676 aa21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 SVEP1Q4LDE5 3571 aa21.57■■□□□ 1.04
TM6SF1-202ENST00000322019 RBMXL2O75526 392 aaKnown RBP21.56■■□□□ 1.04
TM6SF1-202ENST00000322019 HPRT1P00492 218 aa21.56■■□□□ 1.04
TM6SF1-202ENST00000322019 DIAPH2-AS1Q14236 149 aa21.56■■□□□ 1.04
TM6SF1-202ENST00000322019 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.56■■□□□ 1.04
TM6SF1-202ENST00000322019 ARHGAP32A7KAX9 2087 aa21.56■■□□□ 1.04
TM6SF1-202ENST00000322019 TOR1AO14656 332 aa21.56■■□□□ 1.04
TM6SF1-202ENST00000322019 CT45A6P0DMU7 189 aa21.56■■□□□ 1.04
TM6SF1-202ENST00000322019 CT45A5P0DMU8 189 aa21.56■■□□□ 1.04
TM6SF1-202ENST00000322019 CT45A7P0DMV0 189 aa21.56■■□□□ 1.04
TM6SF1-202ENST00000322019 IGHV1-8P0DP01 117 aa21.56■■□□□ 1.04
TM6SF1-202ENST00000322019 OR8B3Q8NGG8 313 aa21.56■■□□□ 1.04
TM6SF1-202ENST00000322019 RAB1CQ92928 201 aa21.56■■□□□ 1.04
TM6SF1-202ENST00000322019 TIMD4Q96H15 378 aa21.56■■□□□ 1.04
TM6SF1-202ENST00000322019 OR8B2Q96RD0 313 aa21.56■■□□□ 1.04
TM6SF1-202ENST00000322019 FSTL3O95633 263 aa21.55■■□□□ 1.04
TM6SF1-202ENST00000322019 UBE2KP61086 200 aa21.55■■□□□ 1.04
TM6SF1-202ENST00000322019 TAGLNQ01995 201 aaKnown RBP21.55■■□□□ 1.04
TM6SF1-202ENST00000322019 TNFRSF9Q07011 255 aa21.55■■□□□ 1.04
TM6SF1-202ENST00000322019 WDR25Q64LD2 544 aaPredicted RBP21.55■■□□□ 1.04
TM6SF1-202ENST00000322019 ZDHHC16Q969W1 377 aa21.55■■□□□ 1.04
TM6SF1-202ENST00000322019 RBKSQ9H477 322 aa21.55■■□□□ 1.04
TM6SF1-202ENST00000322019 CHODLQ9H9P2 273 aa21.55■■□□□ 1.04
TM6SF1-202ENST00000322019 COA4Q9NYJ1 87 aa21.55■■□□□ 1.04
TM6SF1-202ENST00000322019 TRBV23-1A0A0A0MS06 115 aa21.54■■□□□ 1.04
TM6SF1-202ENST00000322019 TRAV3A0A0B4J244 114 aa21.54■■□□□ 1.04
TM6SF1-202ENST00000322019 ATG12O94817 140 aa21.54■■□□□ 1.04
TM6SF1-202ENST00000322019 FAM157CP0CG43 387 aa21.54■■□□□ 1.04
TM6SF1-202ENST00000322019 OR5C1Q8NGR4 320 aa21.54■■□□□ 1.04
TM6SF1-202ENST00000322019 NEIL1Q96FI4 390 aaPredicted RBP21.54■■□□□ 1.04
TM6SF1-202ENST00000322019 RAB40CQ96S21 281 aa21.54■■□□□ 1.04
TM6SF1-202ENST00000322019 MRPL20Q9BYC9 149 aaKnown RBP21.54■■□□□ 1.04
TM6SF1-202ENST00000322019 MS4A7Q9GZW8 240 aaPredicted RBP21.54■■□□□ 1.04
TM6SF1-202ENST00000322019 UBR5O95071 2799 aaPredicted RBP21.53■■□□□ 1.04
TM6SF1-202ENST00000322019 JTBO76095 146 aa21.53■■□□□ 1.04
TM6SF1-202ENST00000322019 IGKV1-16P04430 117 aa21.53■■□□□ 1.04
TM6SF1-202ENST00000322019 THBS3P49746 956 aa21.53■■□□□ 1.04
TM6SF1-202ENST00000322019 DYNLT3P51808 116 aa21.53■■□□□ 1.04
TM6SF1-202ENST00000322019 OR10X1Q8NGY0 326 aa21.53■■□□□ 1.04
TM6SF1-202ENST00000322019 QTRT1Q9BXR0 403 aaKnown RBP21.53■■□□□ 1.04
TM6SF1-202ENST00000322019 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.53■■□□□ 1.04
TM6SF1-202ENST00000322019 PSENENQ9NZ42 101 aa21.53■■□□□ 1.04
TM6SF1-202ENST00000322019 PLA2G2EQ9NZK7 142 aa21.53■■□□□ 1.04
TM6SF1-202ENST00000322019 HSPB7Q9UBY9 170 aa21.53■■□□□ 1.04
TM6SF1-202ENST00000322019 C22orf46C9J442 243 aa21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 J3QR06 171 aa21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 GAPDHP04406 335 aaKnown RBP21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 MMP9P14780 707 aa21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 OR4S2Q8NH73 311 aa21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 SLC25A31Q9H0C2 315 aa21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 MIOXQ9UGB7 285 aa21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 RFNGQ9Y644 331 aa21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 PPIAL4CA0A0B4J2A2 164 aa21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 RBFOX2O43251 390 aaKnown RBP eCLIP21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 TXNL1O43396 289 aa21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 PPIAL4GP0DN37 164 aa21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 RPL23AP62750 156 aaKnown RBP21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 ABHD12Q8N2K0 398 aa21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 SH3BGRL3Q9H299 93 aa21.52■■□□□ 1.04
TM6SF1-202ENST00000322019 METTL15P1P0C7V9 234 aa21.51■■□□□ 1.03
TM6SF1-202ENST00000322019 M6PRP20645 277 aa21.51■■□□□ 1.03
TM6SF1-202ENST00000322019 SPANXN5Q5MJ07 72 aa21.51■■□□□ 1.03
TM6SF1-202ENST00000322019 ZNF833PQ6ZTB9 187 aa21.51■■□□□ 1.03
TM6SF1-202ENST00000322019 UBAC2Q8NBM4 344 aa21.51■■□□□ 1.03
TM6SF1-202ENST00000322019 HSD17B11Q8NBQ5 300 aa21.51■■□□□ 1.03
TM6SF1-202ENST00000322019 WSB1Q9Y6I7 421 aa21.51■■□□□ 1.03
TM6SF1-202ENST00000322019 F12P00748 615 aaPredicted RBP21.51■■□□□ 1.03
TM6SF1-202ENST00000322019 TMEM140Q9NV12 185 aa21.51■■□□□ 1.03
TM6SF1-202ENST00000322019 LRRK2Q5S007 2527 aa21.5■■□□□ 1.03
TM6SF1-202ENST00000322019 NQO2P16083 231 aa21.5■■□□□ 1.03
TM6SF1-202ENST00000322019 KIR2DS2P43631 304 aa21.5■■□□□ 1.03
TM6SF1-202ENST00000322019 SREK1IP1Q8N9Q2 155 aaPredicted RBP21.5■■□□□ 1.03
TM6SF1-202ENST00000322019 BPIFCQ8NFQ6 507 aa21.5■■□□□ 1.03
TM6SF1-202ENST00000322019 RNF141Q8WVD5 230 aa21.5■■□□□ 1.03
TM6SF1-202ENST00000322019 TMEM133Q9H2Q1 129 aa21.5■■□□□ 1.03
TM6SF1-202ENST00000322019 ERVK-16P61578 105 aa21.49■■□□□ 1.03
TM6SF1-202ENST00000322019 RPS16P62249 146 aaKnown RBP21.49■■□□□ 1.03
TM6SF1-202ENST00000322019 ARL16Q0P5N6 197 aa21.49■■□□□ 1.03
TM6SF1-202ENST00000322019 MARC2Q969Z3 335 aa21.49■■□□□ 1.03
TM6SF1-202ENST00000322019 ONECUT1Q9UBC0 465 aa21.49■■□□□ 1.03
TM6SF1-202ENST00000322019 GNB2P62879 340 aa21.49■■□□□ 1.03
TM6SF1-202ENST00000322019 RAB39BQ96DA2 213 aa21.49■■□□□ 1.03
TM6SF1-202ENST00000322019 RHOVQ96L33 236 aa21.49■■□□□ 1.03
TM6SF1-202ENST00000322019 SLC35D1Q9NTN3 355 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms