RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 NIT1Q86X76 327 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 COMMD2Q86X83 199 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 Q8N976 141 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 OR51T1Q8NGJ9 327 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 GPER1Q99527 375 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 PLK3Q9H4B4 646 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 NAA60Q9H7X0 242 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 B4GALT7Q9UBV7 327 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 R4GMQ9 66 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 GAGE12BA1L429 117 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 KBTBD11O94819 623 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 TMEM50AO95807 157 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 CSTAP01040 98 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 TYMSP04818 313 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 CBLN1P23435 193 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 BLVRBP30043 206 aaPredicted RBP7.96□□□□□ -1.14
CAPN3-201ENST00000318023 MTCP1P56278 107 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 PRDX4Q13162 271 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 WDYHV1Q96HA8 205 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 TRIB1Q96RU8 372 aa7.96□□□□□ -1.14
CAPN3-201ENST00000318023 RNF212BA8MTL3 300 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 CORTO00230 105 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 ZNF737O75373 536 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 GYPAP02724 150 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 AADACP22760 399 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 PAFAH1B2P68402 229 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.95□□□□□ -1.14
CAPN3-201ENST00000318023 KCNIP4Q6PIL6 250 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-201ENST00000318023 ODF3L1Q8IXM7 274 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 OR52L2PQ8NGH6 319 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 GATAD1Q8WUU5 269 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 SLAMF6Q96DU3 332 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 PECRQ9BY49 303 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 ZNF586Q9NXT0 402 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 HSPB2A8KAH6 182 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 PPP1CBP62140 327 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 HSPB2Q16082 182 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 ZNF324BQ6AW86 544 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-201ENST00000318023 WDR73Q6P4I2 378 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 SIGLECL1Q8N7X8 197 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 OR52N5Q8NH56 324 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 SSC4DQ8WTU2 575 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 GPHA2Q96T91 129 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 PLEKHF2Q9H8W4 249 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 MCTS1Q9ULC4 181 aaKnown RBP7.95□□□□□ -1.14
CAPN3-201ENST00000318023 MYO9AB2RTY4 2548 aa7.95□□□□□ -1.14
CAPN3-201ENST00000318023 CRISP2P16562 243 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 PMCHP20382 165 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 IL11P20809 199 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 GRNP28799 593 aaKnown RBP7.94□□□□□ -1.14
CAPN3-201ENST00000318023 OPRM1P35372 400 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 PTGDSP41222 190 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 EMC4Q5J8M3 183 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 LIAT1Q6ZQX7 453 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 C6orf201Q7Z4U5 140 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 OR2V1Q8NHB1 315 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 ZNF519Q8TB69 540 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 C1orf147Q96MC9 270 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-201ENST00000318023 TBL2Q9Y4P3 447 aaKnown RBP7.94□□□□□ -1.14
CAPN3-201ENST00000318023 EGR1P18146 543 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 ZNF133P52736 654 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-201ENST00000318023 RHOGP84095 191 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 MEF2BQ02080 365 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-201ENST00000318023 ROM1Q03395 351 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 TMEM267Q0VDI3 215 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-201ENST00000318023 PRSS57Q6UWY2 283 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 ZNF440Q8IYI8 595 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 OR1N2Q8NGR9 330 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 ZNF524Q96C55 264 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 C18orf12Q96KH6 178 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 ZNF286AQ9HBT8 521 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 IGHV1-69-2A0A0G2JMI3 117 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 DUXBA0A1W2PPF3 345 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 PGPEP1LA6NFU8 196 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 MSTNO14793 375 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 WNT2P09544 360 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 ZNF728P0DKX0 622 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 EGR4Q05215 589 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 SGCBQ16585 318 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 CNEP1R1Q8N9A8 125 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 OR4F5Q8NH21 305 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 ST6GALNAC6Q969X2 333 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 MSI2Q96DH6 328 aaKnown RBP7.94□□□□□ -1.14
CAPN3-201ENST00000318023 UHRF2Q96PU4 802 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 OR4F4Q96R69 305 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 OR10A2Q9H208 303 aa7.94□□□□□ -1.14
CAPN3-201ENST00000318023 ZNF850A8MQ14 1090 aa7.93□□□□□ -1.14
CAPN3-201ENST00000318023 SRP14P37108 136 aaKnown RBP7.93□□□□□ -1.14
CAPN3-201ENST00000318023 GABRA2P47869 451 aa7.93□□□□□ -1.14
CAPN3-201ENST00000318023 AMTP48728 403 aa7.93□□□□□ -1.14
CAPN3-201ENST00000318023 POU3F1Q03052 451 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-201ENST00000318023 SAMD13Q5VXD3 122 aa7.93□□□□□ -1.14
CAPN3-201ENST00000318023 LCN12Q6JVE5 192 aa7.93□□□□□ -1.14
CAPN3-201ENST00000318023 C1QL2Q7Z5L3 287 aa7.93□□□□□ -1.14
CAPN3-201ENST00000318023 MRPL30Q8TCC3 161 aaKnown RBP7.93□□□□□ -1.14
CAPN3-201ENST00000318023 P2RX4Q99571 388 aa7.93□□□□□ -1.14
CAPN3-201ENST00000318023 COA3Q9Y2R0 106 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-201ENST00000318023 IGHV3-15A0A0B4J1V0 119 aa7.93□□□□□ -1.14
CAPN3-201ENST00000318023 TRAV1-1A0A0B4J248 108 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms