RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SCCPDHQ8NBX0 429 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 TENM4Q6N022 2769 aa10.96□□□□□ -0.65
CPNE1-201ENST00000317677 TRAV39A0A0B4J263 110 aa10.96□□□□□ -0.65
CPNE1-201ENST00000317677 BMP5P22003 454 aa10.96□□□□□ -0.65
CPNE1-201ENST00000317677 CHRNB4P30926 498 aa10.96□□□□□ -0.65
CPNE1-201ENST00000317677 HOXA4Q00056 320 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-201ENST00000317677 ATP6V1FQ16864 119 aa10.96□□□□□ -0.65
CPNE1-201ENST00000317677 SLC35E1Q96K37 410 aa10.96□□□□□ -0.65
CPNE1-201ENST00000317677 TP53RKQ96S44 253 aa10.96□□□□□ -0.65
CPNE1-201ENST00000317677 PCGF1Q9BSM1 259 aa10.96□□□□□ -0.65
CPNE1-201ENST00000317677 RTL8AQ9BWD3 113 aa10.96□□□□□ -0.65
CPNE1-201ENST00000317677 RBKSQ9H477 322 aa10.96□□□□□ -0.65
CPNE1-201ENST00000317677 DECR2Q9NUI1 292 aa10.96□□□□□ -0.65
CPNE1-201ENST00000317677 LRP5LA4QPB2 252 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 PRRG2O14669 202 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 CCL25O15444 150 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 YPEL1O60688 119 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 TYMSP04818 313 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 KITLGP21583 273 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 CEBPGP53567 150 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 ERVK11-1P61568 191 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 RPL23AP62750 156 aaKnown RBP10.96□□□□□ -0.66
CPNE1-201ENST00000317677 VAMP2P63027 116 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 MPV17LQ2QL34 196 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 ACTL10Q5JWF8 245 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 OR8G2PQ6IF36 304 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 C11orf53Q8IXP5 236 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 LRTM2Q8N967 370 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 YPEL2Q96QA6 119 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 P2RX4Q99571 388 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 ZNF442Q9H7R0 627 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 SEPSECSQ9HD40 501 aaKnown RBP10.96□□□□□ -0.66
CPNE1-201ENST00000317677 CISD1Q9NZ45 108 aaKnown RBP10.96□□□□□ -0.66
CPNE1-201ENST00000317677 SH3BGRL2Q9UJC5 107 aa10.96□□□□□ -0.66
CPNE1-201ENST00000317677 FLNBO75369 2602 aaKnown RBP10.95□□□□□ -0.66
CPNE1-201ENST00000317677 CADP27708 2225 aa10.95□□□□□ -0.66
CPNE1-201ENST00000317677 TRAV24A0A0B4J272 114 aa10.95□□□□□ -0.66
CPNE1-201ENST00000317677 A0A1B0GV50 99 aa10.95□□□□□ -0.66
CPNE1-201ENST00000317677 CRYM-AS1A6NIL9 109 aa10.95□□□□□ -0.66
CPNE1-201ENST00000317677 TOMM40O96008 361 aa10.95□□□□□ -0.66
CPNE1-201ENST00000317677 NAPSAO96009 420 aa10.95□□□□□ -0.66
CPNE1-201ENST00000317677 KNG1P01042 644 aa10.95□□□□□ -0.66
CPNE1-201ENST00000317677 CTSDP07339 412 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-201ENST00000317677 ATP6V0CP27449 155 aa10.95□□□□□ -0.66
CPNE1-201ENST00000317677 FABP6P51161 128 aa10.95□□□□□ -0.66
CPNE1-201ENST00000317677 PTTG1IPP53801 180 aa10.95□□□□□ -0.66
CPNE1-201ENST00000317677 Q6P435 159 aa10.95□□□□□ -0.66
CPNE1-201ENST00000317677 ZNF880Q6PDB4 577 aa10.95□□□□□ -0.66
CPNE1-201ENST00000317677 CLEC2AQ6UVW9 174 aa10.95□□□□□ -0.66
CPNE1-201ENST00000317677 FAM58AQ8N1B3 248 aa10.95□□□□□ -0.66
CPNE1-201ENST00000317677 MRPL24Q96A35 216 aaKnown RBP10.95□□□□□ -0.66
CPNE1-201ENST00000317677 GNPNAT1Q96EK6 184 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-201ENST00000317677 M0R1B8 84 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 HSPB6O14558 160 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 CDIPTO14735 213 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 UBE2V1Q13404 147 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 MBNL2Q5VZF2 373 aaKnown RBP10.94□□□□□ -0.66
CPNE1-201ENST00000317677 TMEM211Q6ICI0 200 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 ETFRF1Q6IPR1 90 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 LRP11Q86VZ4 500 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 NUDT10Q8NFP7 164 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 OR51G1Q8NGK1 321 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 TBX15Q96SF7 602 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 PLK3Q9H4B4 646 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 CHD3Q12873 2000 aaKnown RBP10.94□□□□□ -0.66
CPNE1-201ENST00000317677 SHANK1Q9Y566 2161 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 ST8SIA3O43173 380 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 PITX3O75364 302 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 ZNF826PQ6ZT77 177 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 LINC01551Q86U37 167 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 CORO2AQ92828 525 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 MOB3AQ96BX8 217 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 AGMATQ9BSE5 352 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 ABHD14AQ9BUJ0 271 aa10.94□□□□□ -0.66
CPNE1-201ENST00000317677 CLEC18AA5D8T8 446 aa10.93□□□□□ -0.66
CPNE1-201ENST00000317677 TIMM8AO60220 97 aaPredicted RBP10.93□□□□□ -0.66
CPNE1-201ENST00000317677 GRPP07492 148 aa10.93□□□□□ -0.66
CPNE1-201ENST00000317677 RPS20P60866 119 aaKnown RBP10.93□□□□□ -0.66
CPNE1-201ENST00000317677 ZNF718Q3SXZ3 478 aa10.93□□□□□ -0.66
CPNE1-201ENST00000317677 C20orf204Q6ZNR8 217 aa10.93□□□□□ -0.66
CPNE1-201ENST00000317677 CLEC18CQ8NCF0 446 aa10.93□□□□□ -0.66
CPNE1-201ENST00000317677 MS4A10Q96PG2 267 aa10.93□□□□□ -0.66
CPNE1-201ENST00000317677 C11orf1Q9H5F2 150 aa10.93□□□□□ -0.66
CPNE1-201ENST00000317677 Q9N2K0 584 aa10.93□□□□□ -0.66
CPNE1-201ENST00000317677 JKAMPQ9P055 326 aa10.93□□□□□ -0.66
CPNE1-201ENST00000317677 UBR5O95071 2799 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-201ENST00000317677 TUBG1P23258 451 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 EWSR1Q01844 656 aaKnown RBP eCLIP10.92□□□□□ -0.66
CPNE1-201ENST00000317677 TMEM183BQ1AE95 376 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 C3orf36Q3SXR2 165 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 PRAMEF6Q5VXH4 476 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 MRGPRGQ86SM5 289 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 H1FOOQ8IZA3 346 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-201ENST00000317677 ZNF286AQ9HBT8 521 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 TUBG2Q9NRH3 451 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 NECAP2Q9NVZ3 263 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 OR6C3Q9NZP0 311 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 ZNF705FA8MVS1 300 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-201ENST00000317677 NDUFS8O00217 210 aa10.92□□□□□ -0.66
CPNE1-201ENST00000317677 SCGB1D2O95969 90 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms