RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 SHANK1Q9Y566 2161 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 TRAV9-2A0A087WT02 112 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 WIPF3A6NGB9 483 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 C17orf112F2Z3M2 114 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 SLC17A3O00476 420 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 TMEM187Q14656 261 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 BATF2Q8N1L9 274 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 OR51H1Q8NH63 302 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 C8orf44Q96CB5 159 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 POM121L2Q96KW2 1035 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 PYGO2Q9BRQ0 406 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 OR1A1Q9P1Q5 309 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 C21orf140B9A014 251 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 CTLA4P16410 223 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 GNB4Q9HAV0 340 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 TAAR3PQ9P1P4 343 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 ANXA10Q9UJ72 324 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 SPTBN2O15020 2390 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 C3orf85A0A1B0GTC6 90 aa9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 TLX3O43711 291 aaPredicted RBP9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 KLF7O75840 302 aaPredicted RBP9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 QTRT1Q9BXR0 403 aaKnown RBP9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 GP6Q9HCN6 339 aa9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 DNAJB12Q9NXW2 375 aaKnown RBP9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 RNF115Q9Y4L5 304 aa9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 LOC101059948A0A1B0GTJ6 334 aa9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 HRKO00198 91 aa9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 PNMTP11086 282 aa9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 PDCD1Q15116 288 aa9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 PET117Q6UWS5 81 aa9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 OR2T6Q8NHC8 308 aa9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 PERPQ96FX8 193 aa9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 TMEM38BQ9NVV0 291 aa9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 PSENENQ9NZ42 101 aa9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 KCNS2Q9ULS6 477 aa9.96□□□□□ -0.81
LDLRAD3-201ENST00000315571 DMXL1Q9Y485 3027 aa9.96□□□□□ -0.82
LDLRAD3-201ENST00000315571 IGHV2-26A0A0B4J1V2 119 aa9.96□□□□□ -0.82
LDLRAD3-201ENST00000315571 TRAV8-6A0A0B4J262 113 aa9.96□□□□□ -0.82
LDLRAD3-201ENST00000315571 ALG1L2C9J202 215 aa9.96□□□□□ -0.82
LDLRAD3-201ENST00000315571 SPINK2P20155 84 aa9.96□□□□□ -0.82
LDLRAD3-201ENST00000315571 MORN2Q502X0 79 aa9.96□□□□□ -0.82
LDLRAD3-201ENST00000315571 HLA-DQA1Q5Y7H0 255 aa9.96□□□□□ -0.82
LDLRAD3-201ENST00000315571 OR10G9Q8NGN4 311 aa9.96□□□□□ -0.82
LDLRAD3-201ENST00000315571 OR10G7Q8NGN6 311 aa9.96□□□□□ -0.82
LDLRAD3-201ENST00000315571 PBOV1Q9GZY1 135 aa9.96□□□□□ -0.82
LDLRAD3-201ENST00000315571 ZNF331Q9NQX6 463 aaPredicted RBP9.96□□□□□ -0.82
LDLRAD3-201ENST00000315571 KCNIP1Q9NZI2 227 aa9.96□□□□□ -0.82
LDLRAD3-201ENST00000315571 DIDO1Q9BTC0 2240 aaKnown RBP9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 A0A087X0K7 114 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 LOC102725191A0A1B0GVB3 256 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 PRSS37A4D1T9 235 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 ETV2O00321 342 aaPredicted RBP9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 ADH4P08319 380 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 FSTP19883 344 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 LGALS7P47929 136 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 FHL5Q5TD97 284 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 IGF2-ASQ6U949 168 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 OR2K2Q8NGT1 345 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 OR2D2Q9H210 308 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 GCM1Q9NP62 436 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 FER1L5A0AVI2 2057 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 FAM231BA6NCW3 169 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 TMEM250H0YL14 139 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 DXOO77932 396 aaKnown RBP9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 IFI6P09912 130 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 PSG6Q00889 435 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 FUT7Q11130 342 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 SCNM1Q9BWG6 230 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 ELOVL5Q9NYP7 299 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 TSSC4Q9Y5U2 329 aaPredicted RBP9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 YLPM1P49750 1951 aaKnown RBP9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 APOBEC3AP31941 199 aaPredicted RBP9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 LHX2P50458 406 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 ACSF3Q4G176 576 aaPredicted RBP9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 OR4P4Q8NGL7 312 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 MMP25Q9NPA2 562 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 TP73-AS1Q9UF72 201 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 HILPDAQ9Y5L2 63 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 SPCS1Q9Y6A9 102 aa9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 PHF3Q92576 2039 aaKnown RBP9.95□□□□□ -0.82
LDLRAD3-201ENST00000315571 IGKV1D-8A0A087WSZ0 117 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 SERINC4A6NH21 518 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 A6NJY4 79 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 G3V4G9 280 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 TAX1BP3O14907 124 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 ZNF324O75467 553 aaPredicted RBP9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 HTR1DP28221 377 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 PLA2G5P39877 138 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 MOB1BQ7L9L4 216 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 LHFPL1Q86WI0 220 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 BPIFA4PQ86YQ2 179 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 OR4C3Q8NH37 302 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 JKAMPQ9P055 326 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 SLC22A20A6NK97 555 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 IGLL1P15814 213 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 HSD52Q0P140 79 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 RNF144BQ7Z419 303 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 C16orf52Q8NHV5 167 aa9.94□□□□□ -0.82
LDLRAD3-201ENST00000315571 CLEC7AQ9BXN2 247 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms