RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 BSPH1Q075Z2 132 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 ELOBQ15370 118 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 ZNF429Q86V71 674 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 ZNF295-AS1Q8N0V1 137 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 FAM169BQ8N8A8 192 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 GCM1Q9NP62 436 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 LYRM2Q9NU23 88 aaPredicted RBP10.34□□□□□ -0.75
RNF4-201ENST00000314289 GNG12Q9UBI6 72 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 RNF115Q9Y4L5 304 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 HIST1H2BKO60814 126 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 HIST1H2BJP06899 126 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 HIST1H2BOP23527 126 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 HIST1H2BBP33778 126 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 PLA2G5P39877 138 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 CD200P41217 278 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 HIST1H2BDP58876 126 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 HIST1H2BCP62807 126 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 HIST2H2BEQ16778 126 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.34□□□□□ -0.75
RNF4-201ENST00000314289 HIST1H2BHQ93079 126 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 HIST1H2BNQ99877 126 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 HIST1H2BMQ99879 126 aa10.34□□□□□ -0.75
RNF4-201ENST00000314289 LINC00473A8K010 186 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 PPP1R2P9O14990 202 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 S1PR2O95136 353 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 THBDP07204 575 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 SOD3P08294 240 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 FABP4P15090 132 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 TUBG1P23258 451 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 GAMTQ14353 236 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 ZNF645Q8N7E2 425 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 NEUROG1Q92886 237 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 TUBG2Q9NRH3 451 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 AKAP6Q13023 2319 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 TRGV8A0A0C4DH27 118 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 ODAMA1E959 279 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 METTL15P1P0C7V9 234 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 BRWD1-AS2P59051 145 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 PRR7Q8TB68 274 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 CCL13Q99616 98 aa10.33□□□□□ -0.76
RNF4-201ENST00000314289 LIN7CQ9NUP9 197 aaKnown RBP10.33□□□□□ -0.76
RNF4-201ENST00000314289 IGLV3-9A0A075B6K5 115 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 KIAA1324LA8MWY0 1029 aaPredicted RBP10.32□□□□□ -0.76
RNF4-201ENST00000314289 GYPAP02724 150 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 SELENOVP59797 346 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 TMEM108Q6UXF1 575 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 UNQ6494/PRO21346Q6UXR6 183 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 SSX9Q7RTT3 188 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 FAM90A1Q86YD7 464 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 FAM216BQ8N7L0 139 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 C14orf144Q96I85 54 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 PRDM13Q9H4Q3 707 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 PIEZO1Q92508 2521 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 C15orf65H3BRN8 121 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 IFNL4K9M1U5 179 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 PITX3O75364 302 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 SRP19P09132 144 aaKnown RBP10.32□□□□□ -0.76
RNF4-201ENST00000314289 OR4A8P0C604 315 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 KHDC3LQ587J8 217 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 SPSB3Q6PJ21 355 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 MRGPRGQ86SM5 289 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 NIPSNAP3BQ9BS92 247 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 SSUH2Q9Y2M2 353 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 WSB1Q9Y6I7 421 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 ITPR1Q14643 2758 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 RAI1Q7Z5J4 1906 aaPredicted RBP10.32□□□□□ -0.76
RNF4-201ENST00000314289 CLEC18AA5D8T8 446 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 SPINT2O43291 252 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 RBMXL2O75526 392 aaKnown RBP10.32□□□□□ -0.76
RNF4-201ENST00000314289 CLDN1O95832 211 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 MDKP21741 143 aaPredicted RBP10.32□□□□□ -0.76
RNF4-201ENST00000314289 MAS1LP35410 378 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 ZNF134P52741 427 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 ZNF266Q14584 549 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 RPL39P5Q59GN2 51 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 SPANXN5Q5MJ07 72 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 CLEC18CQ8NCF0 446 aa10.32□□□□□ -0.76
RNF4-201ENST00000314289 UNKLQ9H9P5 680 aaKnown RBP10.32□□□□□ -0.76
RNF4-201ENST00000314289 HCFC1P51610 2035 aa10.31□□□□□ -0.76
RNF4-201ENST00000314289 MZT1Q08AG7 82 aa10.31□□□□□ -0.76
RNF4-201ENST00000314289 VKORC1L1Q8N0U8 176 aa10.31□□□□□ -0.76
RNF4-201ENST00000314289 IL22RA2Q969J5 263 aa10.31□□□□□ -0.76
RNF4-201ENST00000314289 WFIKKN1Q96NZ8 548 aa10.31□□□□□ -0.76
RNF4-201ENST00000314289 A0A1B0GU03 582 aa10.31□□□□□ -0.76
RNF4-201ENST00000314289 A0A1B0GWJ7 208 aa10.31□□□□□ -0.76
RNF4-201ENST00000314289 SEC14L6B5MCN3 397 aa10.31□□□□□ -0.76
RNF4-201ENST00000314289 SLC31A2O15432 143 aa10.31□□□□□ -0.76
RNF4-201ENST00000314289 PROP1O75360 226 aa10.31□□□□□ -0.76
RNF4-201ENST00000314289 ARL16Q0P5N6 197 aa10.31□□□□□ -0.76
RNF4-201ENST00000314289 TVP23CQ96ET8 276 aa10.31□□□□□ -0.76
RNF4-201ENST00000314289 AGMATQ9BSE5 352 aa10.31□□□□□ -0.76
RNF4-201ENST00000314289 ZNRD1Q9P1U0 126 aa10.31□□□□□ -0.76
RNF4-201ENST00000314289 DUXBA0A1W2PPF3 345 aa10.3□□□□□ -0.76
RNF4-201ENST00000314289 SYNGR2O43760 224 aa10.3□□□□□ -0.76
RNF4-201ENST00000314289 SCAF4O95104 1147 aaKnown RBP10.3□□□□□ -0.76
RNF4-201ENST00000314289 RPL23AP62750 156 aaKnown RBP10.3□□□□□ -0.76
RNF4-201ENST00000314289 ICAM4Q14773 271 aa10.3□□□□□ -0.76
RNF4-201ENST00000314289 ADIPOQQ15848 244 aa10.3□□□□□ -0.76
RNF4-201ENST00000314289 NCR3LG1Q68D85 454 aa10.3□□□□□ -0.76
RNF4-201ENST00000314289 SLC25A31Q9H0C2 315 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms