RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 BHLHA15Q7RTS1 189 aaPredicted RBP7.6□□□□□ -1.19
COL6A5-202ENST00000312481 MRGPRDQ8TDS7 321 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 AGRNO00468 2067 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 ZNF816Q0VGE8 651 aaPredicted RBP7.59□□□□□ -1.19
COL6A5-202ENST00000312481 FUT9Q9Y231 359 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 OSTCQ9NRP0 149 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 PXMP4Q9Y6I8 212 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 E9PQ18 207 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 H0Y8X5 98 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 H7C1H1 209 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 ONECUT2O95948 504 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 LYZL2Q7Z4W2 148 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 CLDN16Q9Y5I7 305 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 RAI1Q7Z5J4 1906 aaPredicted RBP7.59□□□□□ -1.19
COL6A5-202ENST00000312481 COL4A5P29400 1685 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 FCGR3BO75015 233 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 TSPOP30536 169 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 CD300CQ08708 224 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 C3orf36Q3SXR2 165 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 LYG1Q8N1E2 194 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 OR4X2Q8NGF9 303 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 HARBI1Q96MB7 349 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 AP5S1Q9NUS5 200 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 PSG11Q9UQ72 335 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 PTPRBP23467 1997 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 A6NL46 340 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 ZNF708P17019 499 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 TMEM249Q2WGJ8 235 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 ZNF383Q8NA42 475 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 H1FXQ92522 213 aaKnown RBP7.59□□□□□ -1.19
COL6A5-202ENST00000312481 ZNF735P0CB33 412 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 RNF151Q2KHN1 245 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 FNDC7Q5VTL7 733 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 FAM169BQ8N8A8 192 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 OR51B2Q9Y5P1 312 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 IGKV3D-11A0A0A0MRZ8 115 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 A0A1W2PRE2 83 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 FAM231BA6NCW3 169 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 SPRY1O43609 319 aaPredicted RBP7.59□□□□□ -1.19
COL6A5-202ENST00000312481 OR8B3Q8NGG8 313 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 SPACA5Q96QH8 159 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 OR8B2Q96RD0 313 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 MAP1LC3AQ9H492 121 aa7.59□□□□□ -1.19
COL6A5-202ENST00000312481 SORL1Q92673 2214 aa7.59□□□□□ -1.2
COL6A5-202ENST00000312481 HES1Q14469 280 aa7.59□□□□□ -1.2
COL6A5-202ENST00000312481 C10orf111Q8N326 155 aa7.59□□□□□ -1.2
COL6A5-202ENST00000312481 GVQW1Q8N7I0 195 aa7.59□□□□□ -1.2
COL6A5-202ENST00000312481 NECAP1Q8NC96 275 aa7.59□□□□□ -1.2
COL6A5-202ENST00000312481 ADAD2Q8NCV1 583 aaKnown RBP7.59□□□□□ -1.2
COL6A5-202ENST00000312481 SLC25A2Q9BXI2 301 aa7.59□□□□□ -1.2
COL6A5-202ENST00000312481 NPIPB7O75200 414 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 SCGB1C2P0DMR2 95 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 PSG5Q15238 335 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 OR9G4Q8NGQ1 327 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 TP53RKQ96S44 253 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 GPA33Q99795 319 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 CA6P23280 308 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 LOC105371267A0A1B0GV96 52 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 A0A1W2PQM1 296 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 GNG7O60262 68 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 GNB2P62879 340 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 SFTPA2Q8IWL1 248 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 SFTPA1Q8IWL2 248 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 DSCAML1Q8TD84 2053 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 PEBP1P30086 187 aaKnown RBP7.58□□□□□ -1.2
COL6A5-202ENST00000312481 ARF6P62330 175 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 RELQ04864 619 aaPredicted RBP7.58□□□□□ -1.2
COL6A5-202ENST00000312481 SP6Q3SY56 376 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 TRMT61AQ96FX7 289 aaKnown RBP7.58□□□□□ -1.2
COL6A5-202ENST00000312481 SELENOHQ8IZQ5 122 aaKnown RBP7.58□□□□□ -1.2
COL6A5-202ENST00000312481 TMEM170AQ8WVE7 144 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 RNF5Q99942 180 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 FAM157CP0CG43 387 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 CT83Q5H943 113 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 IL36BQ9NZH7 164 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 SCO1O75880 301 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 CCL7P80098 99 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 MGAT2Q10469 447 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.58□□□□□ -1.2
COL6A5-202ENST00000312481 MS4A3Q96HJ5 214 aa7.58□□□□□ -1.2
COL6A5-202ENST00000312481 OR2W5A6NFC9 320 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 CDX4O14627 284 aaPredicted RBP7.57□□□□□ -1.2
COL6A5-202ENST00000312481 MFAP2P55001 183 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 LINC00469Q8N7U9 141 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 LRRC29Q8WV35 223 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 hCG_38984A0A1B0GV85 526 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 CDAP32320 146 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 CLDND2Q8NHS1 167 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 RAB37Q96AX2 223 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 MRPL27Q9P0M9 148 aaKnown RBP7.57□□□□□ -1.2
COL6A5-202ENST00000312481 ADAMTS20P59510 1910 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 EIF3GO75821 320 aaKnown RBP eCLIP7.57□□□□□ -1.2
COL6A5-202ENST00000312481 PPP1CCP36873 323 aaKnown RBP7.57□□□□□ -1.2
COL6A5-202ENST00000312481 MPV17P39210 176 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 RHOVQ96L33 236 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 TBX15Q96SF7 602 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 TNFSF12O43508 249 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 FAM214BQ7L5A3 538 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 LHFPL1Q86WI0 220 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms