RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SAXO1Q8IYX7 474 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 PRDM14Q9GZV8 571 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 METTL1Q9UBP6 276 aaKnown RBP13.43□□□□□ -0.26
HCFC1-201ENST00000310441 PRSS23O95084 383 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 MRPL24Q96A35 216 aaKnown RBP13.43□□□□□ -0.26
HCFC1-201ENST00000310441 ZNF831Q5JPB2 1677 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 CACNA1EQ15878 2313 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 VENTXO95231 258 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 TNFRSF19Q9NS68 423 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 TGIF2-C20orf24A0A0A6YYL0 155 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 OR8G5Q8NG78 346 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 FAM27BQ5VT28 67 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 FAM159AQ6UWV7 190 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 CACNA1HO95180 2353 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 ISG15P05161 165 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 PRR7Q8TB68 274 aa13.43□□□□□ -0.26
HCFC1-201ENST00000310441 RBKSQ9H477 322 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 TINAGQ9UJW2 476 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 FCGR3AP08637 254 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 CTGFP29279 349 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 PGLYRP4Q96LB8 373 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 TMEM262E9PQX1 116 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 PTGDSP41222 190 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 ATP5G2Q06055 141 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 KIAA0040Q15053 153 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 LINC01555Q8NAE3 123 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 NYNRINQ9P2P1 1898 aaKnown RBP13.42□□□□□ -0.26
HCFC1-201ENST00000310441 LY75O60449 1722 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 ZNF146Q15072 292 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 EEF1AKMT3Q96AZ1 226 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 PCGF1Q9BSM1 259 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 TRAV9-1A0A075B6T8 112 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 NGFRP08138 427 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 MUC1P15941 1255 aaPredicted RBP13.42□□□□□ -0.26
HCFC1-201ENST00000310441 TMEM30AQ9NV96 361 aa13.42□□□□□ -0.26
HCFC1-201ENST00000310441 TET1Q8NFU7 2136 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 HKR1P10072 659 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 MAGEA5P43359 124 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 WFDC3Q8IUB2 231 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 ZNF815PA8K554 130 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 MOSPD3O75425 235 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 ASAH2BP0C7U1 165 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 HIST1H2BAQ96A08 127 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 TRAV8-7A0A075B6U6 113 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 TSPAN7P41732 249 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 TRAV39A0A0B4J263 110 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 C7orf71A4D174 169 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 TRGC2P03986 189 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 GPX4P36969 197 aaPredicted RBP13.41□□□□□ -0.26
HCFC1-201ENST00000310441 GLIPR1P48060 266 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 hCG_38984A0A1B0GV85 526 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 SOSTQ9BQB4 213 aa13.41□□□□□ -0.26
HCFC1-201ENST00000310441 ELF5Q9UKW6 265 aaPredicted RBP13.41□□□□□ -0.26
HCFC1-201ENST00000310441 PSG6Q00889 435 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 GCSAMLQ5JQS6 135 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 DNM1P46Q6ZS02 220 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 MPZL1O95297 269 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 C8orf88P0DMB2 117 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 SRSF5Q13243 272 aaKnown RBP13.4□□□□□ -0.26
HCFC1-201ENST00000310441 MSRB3Q8IXL7 192 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 OR2K2Q8NGT1 345 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 FAM216AQ8WUB2 273 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 TAF15Q92804 592 aaKnown RBP eCLIP13.4□□□□□ -0.26
HCFC1-201ENST00000310441 SMOC1Q9H4F8 434 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 MARCH11A6NNE9 402 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 APELAP0DMC3 54 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 GUCA2BQ16661 112 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 PSMG3Q9BT73 122 aaPredicted RBP13.4□□□□□ -0.26
HCFC1-201ENST00000310441 SHANK3Q9BYB0 1731 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 CLDND2Q8NHS1 167 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 FAM209BQ5JX69 171 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 FAM71F2Q6NXP2 309 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 PHLDA1Q8WV24 401 aaPredicted RBP13.4□□□□□ -0.26
HCFC1-201ENST00000310441 ST6GALNAC2Q9UJ37 374 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 CNTFRP26992 372 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 ZP4Q12836 540 aa13.4□□□□□ -0.26
HCFC1-201ENST00000310441 MBNL2Q5VZF2 373 aaKnown RBP13.4□□□□□ -0.26
HCFC1-201ENST00000310441 ZIC1Q15915 447 aa13.4□□□□□ -0.27
HCFC1-201ENST00000310441 DNASE2BQ8WZ79 361 aa13.4□□□□□ -0.27
HCFC1-201ENST00000310441 GGACTQ9BVM4 153 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 VSIG8P0DPA2 414 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 SRIP30626 198 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 HIKESHIQ53FT3 197 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 TREM2Q9NZC2 230 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 A0A1B0GV90 55 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 PF4V1P10720 104 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 NXPH1P58417 271 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 CBLN3Q6UW01 205 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 SCN10AQ9Y5Y9 1956 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 A0A1B0GTL3 188 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 GPR6P46095 362 aaPredicted RBP13.39□□□□□ -0.27
HCFC1-201ENST00000310441 FMC1Q96HJ9 113 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 CEACAM4O75871 244 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 STARD6P59095 220 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 LCN2P80188 198 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 TNFRSF9Q07011 255 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 RNFT1Q5M7Z0 435 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 MRPS18AQ9NVS2 196 aaKnown RBP13.39□□□□□ -0.27
HCFC1-201ENST00000310441 NEU1Q99519 415 aa13.39□□□□□ -0.27
HCFC1-201ENST00000310441 SPAG8Q99932 426 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms