RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 SPSB2Q99619 263 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 TMEM70Q9BUB7 260 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 CLDN16Q9Y5I7 305 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 ZNF735P0CB33 412 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 LGALS3P17931 250 aaKnown RBP7.05□□□□□ -1.28
VPS41-202ENST00000310301 RNF122Q9H9V4 155 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 GPR132Q9UNW8 380 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 AUP1Q9Y679 476 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 A0A1B0GWB2 263 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 TMEM210A6NLX4 147 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 J3QR06 171 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 ERGP11308 486 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 HOXB1P14653 301 aaPredicted RBP7.05□□□□□ -1.28
VPS41-202ENST00000310301 LSM6P62312 80 aaKnown RBP7.05□□□□□ -1.28
VPS41-202ENST00000310301 OR10AG1Q8NH19 301 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 FAM57AQ8TBR7 257 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 IGKV3-7A0A075B6H7 116 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 RBFOX2O43251 390 aaKnown RBP eCLIP7.05□□□□□ -1.28
VPS41-202ENST00000310301 SYNGR1O43759 233 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 CA1P00915 261 aaPredicted RBP7.05□□□□□ -1.28
VPS41-202ENST00000310301 PEBP1P30086 187 aaKnown RBP7.05□□□□□ -1.28
VPS41-202ENST00000310301 LGALS7P47929 136 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 FHITP49789 147 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 PRSS8Q16651 343 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 ZXDCQ2QGD7 858 aaPredicted RBP7.05□□□□□ -1.28
VPS41-202ENST00000310301 TAF15Q92804 592 aaKnown RBP eCLIP7.05□□□□□ -1.28
VPS41-202ENST00000310301 TXNDC17Q9BRA2 123 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 TRBV9A0A0B4J1U6 114 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 CDIPTO14735 213 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 PPIHO43447 177 aaKnown RBP7.05□□□□□ -1.28
VPS41-202ENST00000310301 LYZL6O75951 148 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 PCOLCEQ15113 449 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 IZUMO4Q1ZYL8 232 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 CXorf66Q5JRM2 361 aaPredicted RBP7.05□□□□□ -1.28
VPS41-202ENST00000310301 ST6GALNAC6Q969X2 333 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 WBP1Q96G27 269 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 SFRP2Q96HF1 295 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 RBKSQ9H477 322 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 MAP1LC3AQ9H492 121 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 CCL27Q9Y4X3 112 aa7.05□□□□□ -1.28
VPS41-202ENST00000310301 MYO16Q9Y6X6 1858 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 PRSS2P07478 247 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 GGTLC2Q14390 218 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 OR52M1Q8NGK5 317 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 ZPLD1Q8TCW7 415 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 HARBI1Q96MB7 349 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 OR8B2Q96RD0 313 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 HPRT1P00492 218 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 TNFSF10P50591 281 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 RIPPLY3P57055 190 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 TEX30Q5JUR7 227 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 CARHSP1Q9Y2V2 147 aaKnown RBP7.04□□□□□ -1.28
VPS41-202ENST00000310301 CD1AP06126 327 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 CBLN1P23435 193 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 CDCP2Q5VXM1 449 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 CHST5Q9GZS9 411 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 HSPB7Q9UBY9 170 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 FNDC1Q4ZHG4 1894 aaPredicted RBP7.04□□□□□ -1.28
VPS41-202ENST00000310301 LIPT2A6NK58 231 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 H0Y980 276 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 SNAI2O43623 268 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 HYPMO75409 117 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 CEACAM3P40198 252 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 LRRC75BQ2VPJ9 315 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 C2orf83Q53S99 150 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 GCSAMLQ5JQS6 135 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 ATRAIDQ6UW56 229 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 OR1L8Q8NGR8 309 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 TMEM222Q9H0R3 208 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 MRPL16Q9NX20 251 aaKnown RBP7.04□□□□□ -1.28
VPS41-202ENST00000310301 SPCS1Q9Y6A9 102 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 GVINP1Q7Z2Y8 2422 aa7.04□□□□□ -1.28
VPS41-202ENST00000310301 THADAQ6YHU6 1953 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 CACNA1CQ13936 2221 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 E9PLN8 166 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 TMPRSS2O15393 492 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 HOXA5P20719 270 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 EFNB1P98172 346 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 FAM214BQ7L5A3 538 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 MMD2Q8IY49 270 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 OR5R1Q8NH85 324 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 VKORC1Q9BQB6 163 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 A8MXK9 166 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 ARL14EPLP0DKL9 152 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 GZMHP20718 246 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 TMEM177Q53S58 311 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 LINC00596Q86U02 117 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 TSPAN2O60636 221 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 MPDU1O75352 247 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 GCM2O75603 506 aaPredicted RBP7.03□□□□□ -1.28
VPS41-202ENST00000310301 RBM11P57052 281 aaKnown RBP7.03□□□□□ -1.28
VPS41-202ENST00000310301 RELQ04864 619 aaPredicted RBP7.03□□□□□ -1.28
VPS41-202ENST00000310301 HIKESHIQ53FT3 197 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 SAPCD1Q5SSQ6 148 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 MIC13Q5XKP0 118 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 SLC25A38Q96DW6 304 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 WNT5BQ9H1J7 359 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 CACNA1IQ9P0X4 2223 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 PGPA6NDG6 321 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 BGLAPP02818 100 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms