RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 UNKLQ9H9P5 680 aaKnown RBP18.31■□□□□ 0.52
IRF3-201ENST00000309877 PLSCR3Q9NRY6 295 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 CACNG5Q9UF02 275 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 DOPEY2Q9Y3R5 2298 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 H0YIZ8 118 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 TOX4O94842 621 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 RRASP10301 218 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 NKX2-1P43699 371 aaPredicted RBP18.31■□□□□ 0.52
IRF3-201ENST00000309877 KLRD1Q13241 179 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 DMBX1Q8NFW5 382 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 OR4P4Q8NGL7 312 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 NABP2Q9BQ15 211 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 PCGF1Q9BSM1 259 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 OR5AC2Q9NZP5 309 aa18.31■□□□□ 0.52
IRF3-201ENST00000309877 FBN2P35556 2912 aa18.3■□□□□ 0.52
IRF3-201ENST00000309877 MARCH11A6NNE9 402 aa18.3■□□□□ 0.52
IRF3-201ENST00000309877 K7EPK0 472 aa18.3■□□□□ 0.52
IRF3-201ENST00000309877 L7N2F9 121 aa18.3■□□□□ 0.52
IRF3-201ENST00000309877 NQO2P16083 231 aa18.3■□□□□ 0.52
IRF3-201ENST00000309877 DHRS7BQ6IAN0 325 aaPredicted RBP18.3■□□□□ 0.52
IRF3-201ENST00000309877 Q6ZRM9 215 aa18.3■□□□□ 0.52
IRF3-201ENST00000309877 FAM71E2Q8N5Q1 922 aa18.3■□□□□ 0.52
IRF3-201ENST00000309877 MFFQ9GZY8 342 aa18.3■□□□□ 0.52
IRF3-201ENST00000309877 TACC2O95359 2948 aa18.3■□□□□ 0.52
IRF3-201ENST00000309877 H7C2Y5 167 aa18.29■□□□□ 0.52
IRF3-201ENST00000309877 INO80EQ8NBZ0 244 aaPredicted RBP18.29■□□□□ 0.52
IRF3-201ENST00000309877 RPEQ96AT9 228 aa18.29■□□□□ 0.52
IRF3-201ENST00000309877 MBD6Q96DN6 1003 aa18.29■□□□□ 0.52
IRF3-201ENST00000309877 TNFSF18Q9UNG2 199 aa18.29■□□□□ 0.52
IRF3-201ENST00000309877 INSIG2Q9Y5U4 225 aa18.29■□□□□ 0.52
IRF3-201ENST00000309877 POMT1Q9Y6A1 747 aa18.29■□□□□ 0.52
IRF3-201ENST00000309877 ARHGAP32A7KAX9 2087 aa18.29■□□□□ 0.52
IRF3-201ENST00000309877 H0YJW9 148 aa18.28■□□□□ 0.52
IRF3-201ENST00000309877 PITX3O75364 302 aa18.28■□□□□ 0.52
IRF3-201ENST00000309877 DEDDO75618 318 aa18.28■□□□□ 0.52
IRF3-201ENST00000309877 GAPDHP04406 335 aaKnown RBP18.28■□□□□ 0.52
IRF3-201ENST00000309877 LYL1P12980 280 aa18.28■□□□□ 0.52
IRF3-201ENST00000309877 CXCL2P19875 107 aa18.28■□□□□ 0.52
IRF3-201ENST00000309877 HTR1DP28221 377 aa18.28■□□□□ 0.52
IRF3-201ENST00000309877 CXorf66Q5JRM2 361 aaPredicted RBP18.28■□□□□ 0.52
IRF3-201ENST00000309877 HCP5Q6MZN7 132 aa18.28■□□□□ 0.52
IRF3-201ENST00000309877 SSX9Q7RTT3 188 aa18.28■□□□□ 0.52
IRF3-201ENST00000309877 PDZD9Q8IXQ8 264 aa18.28■□□□□ 0.52
IRF3-201ENST00000309877 OR5AN1Q8NGI8 311 aa18.28■□□□□ 0.52
IRF3-201ENST00000309877 P0C879 139 aa18.28■□□□□ 0.52
IRF3-201ENST00000309877 MMP9P14780 707 aa18.28■□□□□ 0.52
IRF3-201ENST00000309877 HOXB4P17483 251 aaPredicted RBP18.28■□□□□ 0.52
IRF3-201ENST00000309877 C4BPBP20851 252 aa18.28■□□□□ 0.52
IRF3-201ENST00000309877 NUP62P37198 522 aaPredicted RBP18.28■□□□□ 0.52
IRF3-201ENST00000309877 COA4Q9NYJ1 87 aa18.28■□□□□ 0.52
IRF3-201ENST00000309877 LEUTXA8MZ59 168 aa18.27■□□□□ 0.52
IRF3-201ENST00000309877 TXNL1O43396 289 aa18.27■□□□□ 0.52
IRF3-201ENST00000309877 NXPH3O95157 252 aa18.27■□□□□ 0.52
IRF3-201ENST00000309877 HRASP01112 189 aa18.27■□□□□ 0.52
IRF3-201ENST00000309877 CEACAM3P40198 252 aa18.27■□□□□ 0.52
IRF3-201ENST00000309877 AP2S1P53680 142 aaPredicted RBP18.27■□□□□ 0.52
IRF3-201ENST00000309877 ID3Q02535 119 aa18.27■□□□□ 0.52
IRF3-201ENST00000309877 DPM3Q9P2X0 92 aa18.27■□□□□ 0.52
IRF3-201ENST00000309877 RCL1Q9Y2P8 373 aaKnown RBP18.27■□□□□ 0.52
IRF3-201ENST00000309877 HELZ2Q9BYK8 2649 aaKnown RBP18.27■□□□□ 0.51
IRF3-201ENST00000309877 A0A1W2PRD5 423 aa18.26■□□□□ 0.51
IRF3-201ENST00000309877 A0A1W2PRF3 423 aa18.26■□□□□ 0.51
IRF3-201ENST00000309877 A0A1W2PRM7 423 aa18.26■□□□□ 0.51
IRF3-201ENST00000309877 ODF3BA8MYP8 253 aa18.26■□□□□ 0.51
IRF3-201ENST00000309877 RNASEK-C17orf49H0YIS7 233 aa18.26■□□□□ 0.51
IRF3-201ENST00000309877 WRBO00258 174 aa18.26■□□□□ 0.51
IRF3-201ENST00000309877 MC5RP33032 325 aa18.26■□□□□ 0.51
IRF3-201ENST00000309877 POLR2GP62487 172 aaKnown RBP eCLIP18.26■□□□□ 0.51
IRF3-201ENST00000309877 Q5PR19 223 aa18.26■□□□□ 0.51
IRF3-201ENST00000309877 ACOT7LQ6ZUV0 252 aa18.26■□□□□ 0.51
IRF3-201ENST00000309877 PDPNQ86YL7 162 aa18.26■□□□□ 0.51
IRF3-201ENST00000309877 VKORC1L1Q8N0U8 176 aa18.26■□□□□ 0.51
IRF3-201ENST00000309877 LHX4Q969G2 390 aa18.26■□□□□ 0.51
IRF3-201ENST00000309877 AIFM2Q9BRQ8 373 aa18.26■□□□□ 0.51
IRF3-201ENST00000309877 MAGT1Q9H0U3 335 aa18.26■□□□□ 0.51
IRF3-201ENST00000309877 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.26■□□□□ 0.51
IRF3-201ENST00000309877 E5RGE8 158 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 LY6LH3BQJ8 138 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 TSC22D2O75157 780 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 RBMXL2O75526 392 aaKnown RBP18.25■□□□□ 0.51
IRF3-201ENST00000309877 IGKV1-16P04430 117 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 PVALBP20472 110 aaPredicted RBP18.25■□□□□ 0.51
IRF3-201ENST00000309877 RAB13P51153 203 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 MOB3BQ86TA1 216 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 FLYWCH2Q96CP2 140 aaKnown RBP18.25■□□□□ 0.51
IRF3-201ENST00000309877 TBX15Q96SF7 602 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 NSG2Q9Y328 171 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 WASHC3Q9Y3C0 194 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 CELSR2Q9HCU4 2923 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 IGHV1-3A0A0C4DH29 117 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 B4DSR2 109 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 SHOXO15266 292 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 KCNAB3O43448 404 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 OR2F2O95006 317 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 MSMBP08118 114 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 LGALS4P56470 323 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 PAX8Q06710 450 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 OR2F1Q13607 317 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 MIDNQ504T8 468 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 TPTE2P1Q5T6R2 138 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms