RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 STUB1Q9UNE7 303 aa6.79□□□□□ -1.32
CHD6-201ENST00000309279 LSM4Q9Y4Z0 139 aaKnown RBP6.79□□□□□ -1.32
CHD6-201ENST00000309279 CEPT1Q9Y6K0 416 aa6.79□□□□□ -1.32
CHD6-201ENST00000309279 ARHGAP32A7KAX9 2087 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 TRAV1-2A0A0B4J238 106 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 A0A1W2PRF3 423 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 A0A1W2PRM7 423 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 ISPDA4D126 451 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 CCDC160A6NGH7 325 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 SIGLEC5O15389 551 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 CYB5BO43169 146 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 CYB5AP00167 134 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 MT-CO2P00403 227 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 PAX2Q02962 417 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 GDPGP1Q6ZNW5 385 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 C1QL2Q7Z5L3 287 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 LYPD6BQ8NI32 183 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 CASTOR1Q8WTX7 329 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 OR10C1Q96KK4 312 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 ZNF488Q96MN9 340 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 ZNF665Q9H7R5 613 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 TXNL4BQ9NX01 149 aaKnown RBP6.78□□□□□ -1.32
CHD6-201ENST00000309279 HSPB11Q9Y547 144 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 MTORP42345 2549 aa6.78□□□□□ -1.32
CHD6-201ENST00000309279 TEP1Q99973 2627 aaKnown RBP6.78□□□□□ -1.32
CHD6-201ENST00000309279 IGKV1D-17A0A075B6S4 117 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 IGHV3OR15-7A0A075B7D8 119 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 FAM157AC9JC47 383 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 TRAPPC2LH3BP13 241 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 ANGPTL7O43827 346 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 GYPAP02724 150 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 MT-ND4P03905 459 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 TFAP2AP05549 437 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 IGHV4-31P0DP07 118 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 TMEM225BP0DP42 221 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 HIST1H1EP10412 219 aaKnown RBP6.77□□□□□ -1.33
CHD6-201ENST00000309279 PSG2P11465 335 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 C4BPBP20851 252 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 S100GP29377 79 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 OR3A4PP47883 348 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 TNP2Q05952 138 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 KRTAP1-1Q07627 177 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 ZNF146Q15072 292 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 RPEL1Q2QD12 228 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 C1orf100Q5SVJ3 147 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 GLT8D1Q68CQ7 371 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 LYPD2Q6UXB3 125 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 ZNF788Q6ZQV5 615 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 OR2W3Q7Z3T1 314 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 PNLDC1Q8NA58 520 aaKnown RBP6.77□□□□□ -1.33
CHD6-201ENST00000309279 SDSLQ96GA7 329 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 OR5B12Q96R08 314 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 GPER1Q99527 375 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 GFI1Q99684 422 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 OR51E2Q9H255 320 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 ZFAND3Q9H8U3 227 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 RBFOX1Q9NWB1 397 aaKnown RBP6.77□□□□□ -1.33
CHD6-201ENST00000309279 IL36GQ9NZH8 169 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 FBLN5Q9UBX5 448 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 ZNF222Q9UK12 451 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 CDC42EP3Q9UKI2 254 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 SSR3Q9UNL2 185 aa6.77□□□□□ -1.33
CHD6-201ENST00000309279 NSD1Q96L73 2696 aaPredicted RBP6.77□□□□□ -1.33
CHD6-201ENST00000309279 TRBV9A0A0B4J1U6 114 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 A8MXK9 166 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 LEUTXA8MZ59 168 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 B4DSR2 109 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 ZNF780AO75290 641 aaPredicted RBP6.76□□□□□ -1.33
CHD6-201ENST00000309279 SCO1O75880 301 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 KNG1P01042 644 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 CD74P04233 296 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 GP9P14770 177 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 BCL3P20749 454 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 GADD45AP24522 165 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 CFPP27918 469 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 S100A11P31949 105 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 GZMKP49863 264 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 PRR20EP86478 221 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 PRR20CP86479 221 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 PRR20DP86480 221 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 PRR20BP86481 221 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 PRR20AP86496 221 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 CDK10Q15131 360 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 TIMM50Q3ZCQ8 353 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 SLC16A13Q7RTY0 426 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 JAGN1Q8N5M9 183 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 LINC01356Q8N9X3 169 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 OR10V1Q8NGI7 309 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 TNFAIP8L1Q8WVP5 186 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 C1orf147Q96MC9 270 aaPredicted RBP6.76□□□□□ -1.33
CHD6-201ENST00000309279 NKX3-1Q99801 234 aaPredicted RBP6.76□□□□□ -1.33
CHD6-201ENST00000309279 PDCD10Q9BUL8 212 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 CTSZQ9UBR2 303 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 UFC1Q9Y3C8 167 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 GPR31O00270 319 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 S1PR2O95136 353 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 CDRT1O95170 752 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 HLA-AP01891 365 aaKnown RBP6.76□□□□□ -1.33
CHD6-201ENST00000309279 ZFP36P26651 326 aaKnown RBP6.76□□□□□ -1.33
CHD6-201ENST00000309279 LGALS7P47929 136 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms