RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 MSL2Q9HCI7 577 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 HILPDAQ9Y5L2 63 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 IGKV3D-15A0A087WSY6 115 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 IFITM10A6NMD0 228 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 B4DEV8 164 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 IGKV3-15P01624 115 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 HBZP02008 142 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 LGALS3P17931 250 aaKnown RBP7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 TMEM33P57088 247 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 KLF9Q13886 244 aaPredicted RBP7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 PEAR1Q5VY43 1037 aaPredicted RBP7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 PAXXQ9BUH6 204 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 FLRT3Q9NZU0 649 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 DSPPQ9NZW4 1301 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 CHCHD2Q9Y6H1 151 aaPredicted RBP7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 PTP4A3O75365 173 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 MUC1P15941 1255 aaPredicted RBP7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 MFAP4P55083 255 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 TGIF1Q15583 401 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 MMD2Q8IY49 270 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 TMEM70Q9BUB7 260 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 NMUP48645 174 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 HIKESHIQ53FT3 197 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 OR4X2Q8NGF9 303 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 TMPRSS13Q9BYE2 586 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 FAM74A7A6NL05 159 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 SMAD7O15105 426 aaKnown RBP7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 SRSF10O75494 262 aaKnown RBP7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 NUDT3O95989 172 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 APCSP02743 223 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 CTSDP07339 412 aaPredicted RBP7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 BTF3P20290 206 aaKnown RBP7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 P2RY1P47900 373 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 DYNLT3P51808 116 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 B2MP61769 119 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 DCAF12L2Q5VW00 463 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 IGF2-ASQ6U949 168 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 EEF1AKMT3Q96AZ1 226 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 UCN2Q96RP3 112 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 GPA33Q99795 319 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 TRGC1P0CF51 173 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 ZNF137PP52743 207 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 ST6GALNAC3Q8NDV1 305 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 SLC6A13Q9NSD5 602 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 MRPS18AQ9NVS2 196 aaKnown RBP7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 PTPRSQ13332 1948 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 MEX3AA1L020 520 aaKnown RBP7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 HRKO00198 91 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 C19orf48Q6RUI8 117 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 GLDNQ6ZMI3 551 aaPredicted RBP7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 TBX15Q96SF7 602 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 TNCP24821 2201 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 NUP210LQ5VU65 1888 aa7.19□□□□□ -1.26
PCDHB1-201ENST00000306549 A8MWL6 223 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 ADAP1O75689 374 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 MESTQ5EB52 335 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 OR2V2Q96R30 315 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 WIPI2Q9Y4P8 454 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 M0QZK8 103 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 GEMIN2O14893 280 aaKnown RBP7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 KCNAB3O43448 404 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 PRDX2P32119 198 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 BSXQ3C1V8 233 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 ACSF3Q4G176 576 aaPredicted RBP7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 DMRTC1Q5HYR2 192 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 KIR2DL4Q99706 377 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 TLN1Q9Y490 2541 aaKnown RBP7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 ZNF205O95201 554 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 LINC00271P0C7V0 271 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 SLC25A47Q6Q0C1 308 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 APCDD1LQ8NCL9 501 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 OR2W1Q9Y3N9 320 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 C9orf170A2RU37 121 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 PYCARD-AS1I3L0S3 204 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 DNM1P46Q6ZS02 220 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 SSMEM1Q8WWF3 244 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 FAM168AQ92567 244 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 C2orf88Q9BSF0 95 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 METTL1Q9UBP6 276 aaKnown RBP7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 VAX2Q9UIW0 290 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 LINC00303Q3SY05 128 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 KLK11Q9UBX7 282 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 HIVEP3Q5T1R4 2406 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 NCOR2Q9Y618 2525 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 CCDC168Q8NDH2 2452 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 TMEM229AB2RXF0 380 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 CDC42EP2O14613 210 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 HPRT1P00492 218 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 DTX2Q86UW9 622 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 PHYHIPLQ96FC7 376 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 SNURFLB1AK76 121 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 CTDSPLO15194 276 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 ZNF708P17019 499 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 FSTP19883 344 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 SUMO2P61956 95 aaKnown RBP7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 VGLL1Q99990 258 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 PGPEP1Q9NXJ5 209 aa7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 TMEFF2Q9UIK5 374 aaPredicted RBP7.18□□□□□ -1.26
PCDHB1-201ENST00000306549 LOC105371242A0A075B767 164 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 IGHV3OR15-7A0A075B7D8 119 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms