RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ARL2-SNX15V9GYD0 113 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 MAP1LC3B2A6NCE7 125 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 LINC00473A8K010 186 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 INS-IGF2F8WCM5 200 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 SMPD2O60906 423 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 MMP23AO75900 390 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 NXPH2O95156 264 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 NXPH3O95157 252 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 NGFP01138 241 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 HLA-HP01893 362 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 GYPAP02724 150 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 CD33P20138 364 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 BSXQ3C1V8 233 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 SPATA46Q5T0L3 261 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 TRAT1Q6PIZ9 186 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 YRDCQ86U90 279 aaKnown RBP4.51□□□□□ -1.69
VPS50-202ENST00000305866 FAM222BQ8WU58 562 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 PINX1Q96BK5 328 aaKnown RBP4.51□□□□□ -1.69
VPS50-202ENST00000305866 ANAPC16Q96DE5 110 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 CDX2Q99626 313 aaPredicted RBP4.51□□□□□ -1.69
VPS50-202ENST00000305866 MAP1LC3BQ9GZQ8 125 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 CBLN4Q9NTU7 201 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 KLF13Q9Y2Y9 288 aaPredicted RBP4.51□□□□□ -1.69
VPS50-202ENST00000305866 ARID1AO14497 2285 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 CCDC85CA6NKD9 419 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 VWC2LB2RUY7 222 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 PPP5D1E7EU14 171 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 MRPL33O75394 65 aaKnown RBP4.51□□□□□ -1.69
VPS50-202ENST00000305866 METTL15P1P0C7V9 234 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 LINC00614P0C842 121 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 GALR1P47211 349 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 NKX6-1P78426 367 aaPredicted RBP4.51□□□□□ -1.69
VPS50-202ENST00000305866 MORN2Q502X0 79 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 GCSAMLQ5JQS6 135 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 GDF5OSQ5U4N7 250 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 PVRIGQ6DKI7 326 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 INO80CQ6PI98 192 aaPredicted RBP4.51□□□□□ -1.69
VPS50-202ENST00000305866 TCF23Q7RTU1 214 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 COMMD2Q86X83 199 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 FAM58AQ8N1B3 248 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 ZNF645Q8N7E2 425 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 ZCCHC14Q8WYQ9 949 aaKnown RBP4.51□□□□□ -1.69
VPS50-202ENST00000305866 ZNF488Q96MN9 340 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 WFIKKN1Q96NZ8 548 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 CACNG5Q9UF02 275 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 FBXL7Q9UJT9 491 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 ZNF835Q9Y2P0 537 aa4.51□□□□□ -1.69
VPS50-202ENST00000305866 YTHDF2Q9Y5A9 579 aaKnown RBP4.51□□□□□ -1.69
VPS50-202ENST00000305866 PGPEP1LA6NFU8 196 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 C17orf98A8MV24 154 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 H3BP45 60 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 TNFSF12O43508 249 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 HPRT1P00492 218 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 REG1AP05451 166 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 S100A2P29034 98 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 TIMP3P35625 211 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 LINC00205P59089 165 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 HERV-K104P61576 105 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 FOXE3Q13461 319 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 POU2AF1Q16633 256 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 TMEM30BQ3MIR4 351 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 ZNF66Q6ZN08 573 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 TUSC5Q8IXB3 177 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 PNKDQ8N490 385 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 COQ2Q96H96 371 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 KIAA0100Q14667 2235 aaKnown RBP4.5□□□□□ -1.69
VPS50-202ENST00000305866 CTXND1A0A1B0GTU2 59 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 ODAMA1E959 279 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 LRRC30A6NM36 301 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 ZNF785A8K8V0 405 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 AQP7O14520 342 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 CDX4O14627 284 aaPredicted RBP4.5□□□□□ -1.69
VPS50-202ENST00000305866 LHBP01229 141 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 PRH1P02810 166 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 CCKARP32238 428 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 ATP5G3P48201 142 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 FGFRL1Q8N441 504 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 TMEM106BQ9NUM4 274 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 WDR83OSQ9Y284 106 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 POLDIP2Q9Y2S7 368 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 RNF212BA8MTL3 300 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 F2RL2O00254 374 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 RAB29O14966 203 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 HSPA12AO43301 675 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 PSPNO60542 156 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 LINC00869P0C866 280 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 CNN1P51911 297 aaKnown RBP4.5□□□□□ -1.69
VPS50-202ENST00000305866 MRGPRG-AS1Q2M3A8 158 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 KRTCAP3Q53RY4 240 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 ZNF575Q86XF7 245 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 BATF2Q8N1L9 274 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 ZNF596Q8TC21 504 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 NANOS1Q8WY41 292 aaKnown RBP4.5□□□□□ -1.69
VPS50-202ENST00000305866 ZDHHC16Q969W1 377 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 APH1AQ96BI3 265 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 RCHY1Q96PM5 261 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 MGST2Q99735 147 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 PLSCR4Q9NRQ2 329 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 LIN7CQ9NUP9 197 aaKnown RBP4.5□□□□□ -1.69
VPS50-202ENST00000305866 FOXJ2Q9P0K8 574 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms