RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 MRPL18Q9H0U6 180 aaKnown RBP11.93□□□□□ -0.5
PRKCB-201ENST00000303531 ZIC3O60481 467 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 NUBP1P53384 320 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 FXYD3Q14802 87 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 C10orf128Q5T292 105 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 ASPHD2Q6ICH7 369 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 CDC42EP3Q9UKI2 254 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 VKORC1L1Q8N0U8 176 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 LSM10Q969L4 123 aaKnown RBP11.93□□□□□ -0.5
PRKCB-201ENST00000303531 COLQQ9Y215 455 aaPredicted RBP11.93□□□□□ -0.5
PRKCB-201ENST00000303531 FAM106CPP0CH98 169 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 HOXB1P14653 301 aaPredicted RBP11.93□□□□□ -0.5
PRKCB-201ENST00000303531 ZNF385CQ66K41 422 aaPredicted RBP11.93□□□□□ -0.5
PRKCB-201ENST00000303531 TMEM45BQ96B21 275 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 C16orf92Q96LL3 132 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 HLA-DQA1P01909 254 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 BTF3P20290 206 aaKnown RBP11.92□□□□□ -0.5
PRKCB-201ENST00000303531 ATP1A1-AS1Q5TC04 95 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 MAS1LP35410 378 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 CRYBA2P53672 197 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 COL5A1-AS1Q5SY13 56 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 TMEM74BQ9NUR3 256 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 JPT1Q9UK76 154 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 ARHGEF17Q96PE2 2063 aaPredicted RBP11.92□□□□□ -0.5
PRKCB-201ENST00000303531 NPIPB13A6NJU9 1138 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 NPIPB4C9JG80 1138 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 CA2P00918 260 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 CTSSP25774 331 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 SPATA45Q537H7 98 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 GUCD1Q96NT3 240 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 TP53RKQ96S44 253 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 PARP14Q460N5 1801 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 UCP3P55916 312 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 KBTBD11O94819 623 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 ZNF658BQ4V348 819 aaPredicted RBP11.92□□□□□ -0.5
PRKCB-201ENST00000303531 PGLYRP4Q96LB8 373 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 DNAJC4Q9NNZ3 241 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 TRBV23-1A0A0A0MS06 115 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 AGAP20933 346 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 PTGDSP41222 190 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 OR1N2Q8NGR9 330 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 LOXL4Q96JB6 756 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 SMIM8Q96KF7 97 aa11.92□□□□□ -0.5
PRKCB-201ENST00000303531 CGB1A6NKQ9 187 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 GCGP01275 180 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 ZNF708P17019 499 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 TFPI2P48307 235 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 SHISA5Q8N114 240 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 ALPK2Q86TB3 2170 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 NRXN2Q9P2S2 1712 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 CKS2P33552 79 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 ABHD12Q8N2K0 398 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 ZNF502Q8TBZ5 544 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 LOC390937A0A1W2PQ73 354 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 TCF21O43680 179 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 RSPO4Q2I0M5 234 aaPredicted RBP11.91□□□□□ -0.5
PRKCB-201ENST00000303531 DRAM1Q8N682 238 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 METTL26Q96S19 204 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 A0A1W2PR77 199 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 CD8AP01732 235 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 AMY1AP04745 511 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 FCGR2BP31994 310 aaPredicted RBP11.91□□□□□ -0.5
PRKCB-201ENST00000303531 OR10J6PQ8NGY7 276 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 DOCK3Q8IZD9 2030 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 STAG3L2P0CL84 134 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 C8orf88P0DMB2 117 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 TMEM177Q53S58 311 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 QTRT1Q9BXR0 403 aaKnown RBP11.91□□□□□ -0.5
PRKCB-201ENST00000303531 RAMP1O60894 148 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 REG1AP05451 166 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 TCF19Q9Y242 345 aa11.91□□□□□ -0.5
PRKCB-201ENST00000303531 CRYBB3P26998 211 aa11.9□□□□□ -0.5
PRKCB-201ENST00000303531 UCNP55089 124 aa11.9□□□□□ -0.5
PRKCB-201ENST00000303531 ZP1P60852 638 aa11.9□□□□□ -0.5
PRKCB-201ENST00000303531 SBF2Q86WG5 1849 aa11.9□□□□□ -0.5
PRKCB-201ENST00000303531 CXorf65A6NEN9 183 aa11.9□□□□□ -0.5
PRKCB-201ENST00000303531 OR5P3Q8WZ94 311 aa11.9□□□□□ -0.5
PRKCB-201ENST00000303531 ZNF738Q8NE65 137 aa11.9□□□□□ -0.5
PRKCB-201ENST00000303531 SMIM12Q96EX1 92 aa11.9□□□□□ -0.5
PRKCB-201ENST00000303531 RECKO95980 971 aa11.9□□□□□ -0.5
PRKCB-201ENST00000303531 C1QL2Q7Z5L3 287 aa11.9□□□□□ -0.5
PRKCB-201ENST00000303531 PARLQ9H300 379 aa11.9□□□□□ -0.5
PRKCB-201ENST00000303531 AUP1Q9Y679 476 aa11.9□□□□□ -0.5
PRKCB-201ENST00000303531 UNQ5815/PRO19632Q6UWF5 114 aa11.9□□□□□ -0.5
PRKCB-201ENST00000303531 AKAP6Q13023 2319 aa11.9□□□□□ -0.5
PRKCB-201ENST00000303531 PF4V1P10720 104 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 SPSB4Q96A44 273 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 HINT1P49773 126 aaPredicted RBP11.89□□□□□ -0.51
PRKCB-201ENST00000303531 TM4SF20Q53R12 229 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 RNFT1Q5M7Z0 435 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 NDUFA2O43678 99 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 OR51M1Q9H341 326 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 TNS1Q9HBL0 1735 aaKnown RBP11.89□□□□□ -0.51
PRKCB-201ENST00000303531 FBLL1A6NHQ2 334 aaKnown RBP11.89□□□□□ -0.51
PRKCB-201ENST00000303531 UQCRFS1P47985 274 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 ABLIM2Q6H8Q1 611 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 OR4B1Q8NGF8 309 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 IGKV1D-43A0A0B4J1Z2 117 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 A0A0G2JK05 382 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 LEPROTL1O95214 131 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms