RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 VWA8A3KMH1 1905 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 SRIP30626 198 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 MMDQ15546 238 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 PGLYRP1O75594 196 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-201ENST00000302516 FAM106CPP0CH98 169 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 TSPOP30536 169 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 RUNX1Q01196 453 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 RELQ04864 619 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-201ENST00000302516 HERPUD1Q15011 391 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 C10orf111Q8N326 155 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 ZPLD1Q8TCW7 415 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 FMC1Q96HJ9 113 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 IMMP2LQ96T52 175 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 FAM60AQ9NP50 221 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 PHF3Q92576 2039 aaKnown RBP6.59□□□□□ -1.35
SF3B3-201ENST00000302516 IGHV5-10-1A0A0J9YXX1 117 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 C8orf88P0DMB2 117 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 WNT5AP41221 380 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 C1QL3Q5VWW1 255 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 DUSP15Q9H1R2 295 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-201ENST00000302516 TRIOBPQ9H2D6 2365 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 IFITM2Q01629 132 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 TMEM187Q14656 261 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 MUC15Q8N387 334 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 ALKBH7Q9BT30 221 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-201ENST00000302516 PTPRZ1P23471 2315 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-201ENST00000302516 LINC01565O15544 149 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 NPIPB7O75200 414 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 UPK3AO75631 287 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 NUBP1P53384 320 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 SOX8P57073 446 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 TM4SF20Q53R12 229 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 SLC25A47Q6Q0C1 308 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-201ENST00000302516 OR4C13Q8NGP0 309 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 PARLQ9H300 379 aa6.59□□□□□ -1.35
SF3B3-201ENST00000302516 SIRT4Q9Y6E7 314 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-201ENST00000302516 PEBP1P30086 187 aaKnown RBP6.59□□□□□ -1.36
SF3B3-201ENST00000302516 ZFP36L2P47974 494 aaKnown RBP6.59□□□□□ -1.36
SF3B3-201ENST00000302516 FAM219BQ5XKK7 198 aa6.59□□□□□ -1.36
SF3B3-201ENST00000302516 A1L4Q6 167 aa6.59□□□□□ -1.36
SF3B3-201ENST00000302516 C5orf67F2Z3F1 127 aa6.59□□□□□ -1.36
SF3B3-201ENST00000302516 CDK2AP1O14519 115 aa6.59□□□□□ -1.36
SF3B3-201ENST00000302516 RPL27AP46776 148 aaKnown RBP6.59□□□□□ -1.36
SF3B3-201ENST00000302516 APCDD1LQ8NCL9 501 aa6.59□□□□□ -1.36
SF3B3-201ENST00000302516 ZNF414Q96IQ9 312 aa6.59□□□□□ -1.36
SF3B3-201ENST00000302516 CCL3P10147 92 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 OR51G1Q8NGK1 321 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 KIR2DL4Q99706 377 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 KLK10O43240 276 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 OR2H2O95918 312 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 JPT1Q9UK76 154 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 IGLV1-36A0A0B4J1U3 117 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 RFLNBQ8N5W9 214 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 C16orf92Q96LL3 132 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 HDHD3Q9BSH5 251 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-201ENST00000302516 PLA2G2FQ9BZM2 168 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 MOB4Q9Y3A3 225 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 SLC25A17O43808 307 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 ITGBL1O95965 494 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-201ENST00000302516 CD160O95971 181 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 GPX4P36969 197 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-201ENST00000302516 ECSCRQ19T08 205 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 C10orf126Q8N4M7 172 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 ZNF441Q8N8Z8 693 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 A0A1W2PQM1 296 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 DNAL4O96015 105 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 IGKV1D-16P01601 117 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 ANOS1P23352 680 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 CLDN16Q9Y5I7 305 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 H0YL77 283 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 HRKO00198 91 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 TSPAN2O60636 221 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 ZNF324O75467 553 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-201ENST00000302516 APOBEC4Q8WW27 367 aaKnown RBP6.58□□□□□ -1.36
SF3B3-201ENST00000302516 PGLYRP4Q96LB8 373 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 RABAC1Q9UI14 185 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 PATE4P0C8F1 98 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 UQCRFS1P47985 274 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 DLX6P56179 175 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 SAPCD1Q5SSQ6 148 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 C10orf128Q5T292 105 aa6.58□□□□□ -1.36
SF3B3-201ENST00000302516 DPRXA6NFQ7 191 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 C19orf67A6NJJ6 358 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 C16orf97H3BN30 126 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 GCM2O75603 506 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-201ENST00000302516 TSPAN13O95857 204 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 SLC35B1P78383 322 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 EIF4EBP2Q13542 120 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-201ENST00000302516 C2orf68Q2NKX9 166 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 Q6ZS52 159 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 OR52M1Q8NGK5 317 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 UCN2Q96RP3 112 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 SH3BGRL3Q9H299 93 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 TNFRSF19Q9NS68 423 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 MRPL16Q9NX20 251 aaKnown RBP6.57□□□□□ -1.36
SF3B3-201ENST00000302516 ATP5LO75964 103 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 FGF5P12034 268 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 PCP4P48539 62 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 ARF6P62330 175 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms