RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 ACP7Q6ZNF0 438 aa20.35■□□□□ 0.85
SPTSSA-201ENST00000298130 TMEM37Q8WXS4 190 aa20.35■□□□□ 0.85
SPTSSA-201ENST00000298130 WFIKKN1Q96NZ8 548 aa20.35■□□□□ 0.85
SPTSSA-201ENST00000298130 DCHS1Q96JQ0 3298 aa20.35■□□□□ 0.85
SPTSSA-201ENST00000298130 CATR1Q13166 79 aa20.35■□□□□ 0.85
SPTSSA-201ENST00000298130 EIF4EBP1Q13541 118 aaPredicted RBP20.35■□□□□ 0.85
SPTSSA-201ENST00000298130 UTF1Q5T230 341 aa20.35■□□□□ 0.85
SPTSSA-201ENST00000298130 PATZ1Q9HBE1 687 aaKnown RBP20.35■□□□□ 0.85
SPTSSA-201ENST00000298130 FAM90A26D6RGX4 464 aa20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 OR9G9P0C7N8 305 aa20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 LINC00469Q8N7U9 141 aa20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 ZNF709Q8N972 641 aa20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 GMPPAQ96IJ6 420 aaPredicted RBP20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 DERL1Q9BUN8 251 aa20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 MARCH11A6NNE9 402 aa20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 CCL11P51671 97 aa20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 FAM3BP58499 235 aaPredicted RBP20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 FOXF2Q12947 444 aa20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 IFNL4K9M1U5 179 aa20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 HIST1H1BP16401 226 aaKnown RBP20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 GPX4P36969 197 aaPredicted RBP20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 HES4Q9HCC6 221 aa20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 GFOD1Q9NXC2 390 aa20.34■□□□□ 0.85
SPTSSA-201ENST00000298130 CNOT1A5YKK6 2376 aaKnown RBP20.33■□□□□ 0.85
SPTSSA-201ENST00000298130 FCGR3BO75015 233 aa20.33■□□□□ 0.85
SPTSSA-201ENST00000298130 ZNF66Q6ZN08 573 aa20.33■□□□□ 0.85
SPTSSA-201ENST00000298130 DEFB123Q8N688 67 aa20.33■□□□□ 0.85
SPTSSA-201ENST00000298130 IGHV3OR15-7A0A075B7D8 119 aa20.33■□□□□ 0.84
SPTSSA-201ENST00000298130 NKX2-8O15522 239 aa20.33■□□□□ 0.84
SPTSSA-201ENST00000298130 PROP1O75360 226 aa20.33■□□□□ 0.84
SPTSSA-201ENST00000298130 GYPAP02724 150 aa20.33■□□□□ 0.84
SPTSSA-201ENST00000298130 HNF1AP20823 631 aa20.33■□□□□ 0.84
SPTSSA-201ENST00000298130 DEFA6Q01524 100 aa20.33■□□□□ 0.84
SPTSSA-201ENST00000298130 CST9LP1Q5W188 147 aa20.33■□□□□ 0.84
SPTSSA-201ENST00000298130 LEAP2Q969E1 77 aa20.33■□□□□ 0.84
SPTSSA-201ENST00000298130 ACTR3CQ9C0K3 210 aaPredicted RBP20.33■□□□□ 0.84
SPTSSA-201ENST00000298130 ELOA3CA0A087WX78 387 aaPredicted RBP20.32■□□□□ 0.84
SPTSSA-201ENST00000298130 COX5AP20674 150 aa20.32■□□□□ 0.84
SPTSSA-201ENST00000298130 ATP5G3P48201 142 aa20.32■□□□□ 0.84
SPTSSA-201ENST00000298130 CD177Q8N6Q3 437 aa20.32■□□□□ 0.84
SPTSSA-201ENST00000298130 INTS1Q8N201 2190 aaKnown RBP20.32■□□□□ 0.84
SPTSSA-201ENST00000298130 SLC35E4Q6ICL7 350 aa20.32■□□□□ 0.84
SPTSSA-201ENST00000298130 FUT9Q9Y231 359 aa20.32■□□□□ 0.84
SPTSSA-201ENST00000298130 CLDN14O95500 239 aa20.31■□□□□ 0.84
SPTSSA-201ENST00000298130 RPL39P5Q59GN2 51 aa20.31■□□□□ 0.84
SPTSSA-201ENST00000298130 FAM214BQ7L5A3 538 aa20.31■□□□□ 0.84
SPTSSA-201ENST00000298130 CTDSP1Q9GZU7 261 aa20.31■□□□□ 0.84
SPTSSA-201ENST00000298130 TRAV3A0A0B4J244 114 aa20.31■□□□□ 0.84
SPTSSA-201ENST00000298130 C11orf94C9JXX5 98 aa20.31■□□□□ 0.84
SPTSSA-201ENST00000298130 SPRNQ5BIV9 151 aa20.31■□□□□ 0.84
SPTSSA-201ENST00000298130 R3HDM4Q96D70 268 aa20.31■□□□□ 0.84
SPTSSA-201ENST00000298130 OR5B12Q96R08 314 aa20.31■□□□□ 0.84
SPTSSA-201ENST00000298130 ZDHHC11Q9H8X9 412 aa20.31■□□□□ 0.84
SPTSSA-201ENST00000298130 TIMM9Q9Y5J7 89 aa20.31■□□□□ 0.84
SPTSSA-201ENST00000298130 CEP250Q9BV73 2442 aa20.31■□□□□ 0.84
SPTSSA-201ENST00000298130 XKRY2A2RUG3 117 aa20.3■□□□□ 0.84
SPTSSA-201ENST00000298130 C15orf62A8K5M9 175 aa20.3■□□□□ 0.84
SPTSSA-201ENST00000298130 PPP5D1E7EU14 171 aa20.3■□□□□ 0.84
SPTSSA-201ENST00000298130 CECR9P0C854 216 aa20.3■□□□□ 0.84
SPTSSA-201ENST00000298130 LURAP1LQ8IV03 231 aa20.3■□□□□ 0.84
SPTSSA-201ENST00000298130 LRRC29Q8WV35 223 aa20.3■□□□□ 0.84
SPTSSA-201ENST00000298130 RYDENQ9NUL5 291 aaKnown RBP20.3■□□□□ 0.84
SPTSSA-201ENST00000298130 CACNA1GO43497 2377 aa20.3■□□□□ 0.84
SPTSSA-201ENST00000298130 WDR31Q8NA23 367 aa20.3■□□□□ 0.84
SPTSSA-201ENST00000298130 C9orf106Q8NAJ2 232 aa20.3■□□□□ 0.84
SPTSSA-201ENST00000298130 AGMATQ9BSE5 352 aa20.3■□□□□ 0.84
SPTSSA-201ENST00000298130 PARD6GQ9BYG4 376 aaPredicted RBP20.3■□□□□ 0.84
SPTSSA-201ENST00000298130 SRD5A3Q9H8P0 318 aa20.3■□□□□ 0.84
SPTSSA-201ENST00000298130 DUSP13Q9UII6 198 aa20.3■□□□□ 0.84
SPTSSA-201ENST00000298130 HOXC12P31275 282 aa20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 CDC34P49427 236 aaPredicted RBP20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 GNG12Q9UBI6 72 aa20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 WASF3Q9UPY6 502 aa20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 IFNA10P01566 189 aa20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 AMBPP02760 352 aa20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 CENPVQ7Z7K6 275 aaPredicted RBP20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 MEGF10Q96KG7 1140 aa20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 TMEM210A6NLX4 147 aa20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 ZNF883P0CG24 379 aa20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 TNFSF10P50591 281 aa20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 ACSF3Q4G176 576 aaPredicted RBP20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 Q6ZT83 130 aa20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 LRP11Q86VZ4 500 aa20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 OR2Z1Q8NG97 314 aa20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 CXXC4Q9H2H0 198 aa20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 PITPNC1Q9UKF7 332 aa20.29■□□□□ 0.84
SPTSSA-201ENST00000298130 RRHO14718 337 aa20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 RAB29O14966 203 aa20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 SP9P0CG40 484 aa20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 ABHD12Q8N2K0 398 aa20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 Q8N7P7 452 aa20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 TMEM178AQ8NBL3 297 aa20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 ZNF114Q8NC26 417 aa20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 ZBTB34Q8NCN2 500 aa20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 Q8TCH9 128 aa20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 C14orf144Q96I85 54 aa20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 KIR2DL2P43627 348 aaPredicted RBP20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 FAM201AQ5SY85 155 aa20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 FDCSPQ8NFU4 85 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms