RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 MS4A10Q96PG2 267 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 ZPBPQ9BS86 351 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 IQCF6A8MYZ5 107 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 C12orf77C9JDV5 145 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 YPEL1O60688 119 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 NEURL1O76050 574 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 SCGB1D1O95968 90 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 STAG3L2P0CL84 134 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 STAG3L3P0CL85 134 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 CD82P27701 267 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 CD1BP29016 333 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 TNFSF10P50591 281 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 PMP22Q01453 160 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 MRPL49Q13405 166 aaKnown RBP16.03■□□□□ 0.16
TRA2A-201ENST00000297071 YPEL2Q96QA6 119 aa16.03■□□□□ 0.16
TRA2A-201ENST00000297071 C17orf98A8MV24 154 aa16.02■□□□□ 0.16
TRA2A-201ENST00000297071 OR3A1P47881 315 aa16.02■□□□□ 0.16
TRA2A-201ENST00000297071 TPPP2P59282 170 aa16.02■□□□□ 0.16
TRA2A-201ENST00000297071 ZNF816Q0VGE8 651 aaPredicted RBP16.02■□□□□ 0.16
TRA2A-201ENST00000297071 GAGE1Q13065 139 aa16.02■□□□□ 0.16
TRA2A-201ENST00000297071 DCAF12Q5T6F0 453 aa16.02■□□□□ 0.16
TRA2A-201ENST00000297071 TEX43Q6ZNM6 134 aa16.02■□□□□ 0.16
TRA2A-201ENST00000297071 TMEM106BQ9NUM4 274 aa16.02■□□□□ 0.16
TRA2A-201ENST00000297071 ARL2-SNX15V9GYD0 113 aa16.02■□□□□ 0.16
TRA2A-201ENST00000297071 TRBV9A0A0B4J1U6 114 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 A0A1W2PPV4 95 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 TNFSF13O75888 250 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 CXorf1O96002 111 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 C6orf15Q6UXA7 325 aaPredicted RBP16.01■□□□□ 0.15
TRA2A-201ENST00000297071 SGMS2Q8NHU3 365 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 NINJ1Q92982 152 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 C9JCJ5 164 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 TNFSF15O95150 251 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 NDUFB4O95168 129 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 HBZP02008 142 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 KITLGP21583 273 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 NHLH1Q02575 133 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 SRYQ05066 204 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 CLEC12BQ2HXU8 276 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 MCEMP1Q8IX19 187 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 OR10G8Q8NGN5 311 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 CMTM2Q8TAZ6 248 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 CT55Q8WUE5 264 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 C11orf52Q96A22 123 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 ABI3Q9P2A4 366 aa16.01■□□□□ 0.15
TRA2A-201ENST00000297071 USP34Q70CQ2 3546 aa16■□□□□ 0.15
TRA2A-201ENST00000297071 DOCK11Q5JSL3 2073 aa16■□□□□ 0.15
TRA2A-201ENST00000297071 TIMP3P35625 211 aa16■□□□□ 0.15
TRA2A-201ENST00000297071 ATP5G3P48201 142 aa16■□□□□ 0.15
TRA2A-201ENST00000297071 Q0VG73 95 aa16■□□□□ 0.15
TRA2A-201ENST00000297071 MDP1Q86V88 176 aa16■□□□□ 0.15
TRA2A-201ENST00000297071 ZDHHC16Q969W1 377 aa16■□□□□ 0.15
TRA2A-201ENST00000297071 IL36BQ9NZH7 164 aa16■□□□□ 0.15
TRA2A-201ENST00000297071 USF3Q68DE3 2245 aa15.99■□□□□ 0.15
TRA2A-201ENST00000297071 IFNL4K9M1U5 179 aa15.99■□□□□ 0.15
TRA2A-201ENST00000297071 CDIPTO14735 213 aa15.99■□□□□ 0.15
TRA2A-201ENST00000297071 SMPD2O60906 423 aa15.99■□□□□ 0.15
TRA2A-201ENST00000297071 ADMP35318 185 aa15.99■□□□□ 0.15
TRA2A-201ENST00000297071 HTD2P86397 168 aa15.99■□□□□ 0.15
TRA2A-201ENST00000297071 COX19Q49B96 90 aa15.99■□□□□ 0.15
TRA2A-201ENST00000297071 FBXW9Q5XUX1 488 aa15.99■□□□□ 0.15
TRA2A-201ENST00000297071 TMEM256Q8N2U0 113 aa15.99■□□□□ 0.15
TRA2A-201ENST00000297071 OR51B6Q9H340 312 aa15.99■□□□□ 0.15
TRA2A-201ENST00000297071 HCFC1P51610 2035 aa15.99■□□□□ 0.15
TRA2A-201ENST00000297071 RBFOX2O43251 390 aaKnown RBP eCLIP15.98■□□□□ 0.153e-12■□□□□ 8.2
TRA2A-201ENST00000297071 GALR2O43603 387 aaPredicted RBP15.98■□□□□ 0.15
TRA2A-201ENST00000297071 ADH4P08319 380 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 C1QTNF9P0C862 333 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 IGFBP4P22692 258 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 GCH1P30793 250 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 PRSS8Q16651 343 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 CST9LP1Q5W188 147 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 SPINK14Q6IE38 97 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 MIEN1Q9BRT3 115 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 TTTY12Q9BZ98 90 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 CNTRLQ7Z7A1 2325 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 PRSS46E5RG02 174 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 PSPNO60542 156 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 CER1O95813 267 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 AREGP15514 252 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 RPL19P84098 196 aaKnown RBP15.98■□□□□ 0.15
TRA2A-201ENST00000297071 ZNF718Q3SXZ3 478 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 OR52L2PQ8NGH6 319 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 THOC3Q96J01 351 aaKnown RBP15.98■□□□□ 0.15
TRA2A-201ENST00000297071 TBX15Q96SF7 602 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 QTRT1Q9BXR0 403 aaKnown RBP15.98■□□□□ 0.15
TRA2A-201ENST00000297071 FSCN3Q9NQT6 498 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 SDK1Q7Z5N4 2213 aa15.98■□□□□ 0.15
TRA2A-201ENST00000297071 MARCH11A6NNE9 402 aa15.97■□□□□ 0.15
TRA2A-201ENST00000297071 ZNHIT1O43257 154 aa15.97■□□□□ 0.15
TRA2A-201ENST00000297071 HPRT1P00492 218 aa15.97■□□□□ 0.15
TRA2A-201ENST00000297071 CELA3AP09093 270 aa15.97■□□□□ 0.15
TRA2A-201ENST00000297071 SPATA46Q5T0L3 261 aa15.97■□□□□ 0.15
TRA2A-201ENST00000297071 ABHD17BQ5VST6 288 aa15.97■□□□□ 0.15
TRA2A-201ENST00000297071 ZDHHC11Q9H8X9 412 aa15.97■□□□□ 0.15
TRA2A-201ENST00000297071 TUBG2Q9NRH3 451 aa15.97■□□□□ 0.15
TRA2A-201ENST00000297071 CBLN4Q9NTU7 201 aa15.97■□□□□ 0.15
TRA2A-201ENST00000297071 YLPM1P49750 1951 aaKnown RBP15.97■□□□□ 0.15
TRA2A-201ENST00000297071 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.96■□□□□ 0.15
TRA2A-201ENST00000297071 MT-CO2P00403 227 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms