RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ST6GALNAC6Q969X2 333 aa18.62■□□□□ 0.57
PTX3-201ENST00000295927 TMEM186Q96B77 213 aa18.62■□□□□ 0.57
PTX3-201ENST00000295927 MRPL20Q9BYC9 149 aaKnown RBP18.62■□□□□ 0.57
PTX3-201ENST00000295927 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.62■□□□□ 0.57
PTX3-201ENST00000295927 hCG_1809904A0A1W2PP81 198 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 A0A1W2PPE2 198 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 A0A1W2PR64 198 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 A0A1W2PRV1 198 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 SYNGR2O43760 224 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 NQO2P16083 231 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 CAV2P51636 162 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 PRB3Q04118 309 aaPredicted RBP18.61■□□□□ 0.57
PTX3-201ENST00000295927 NDUFA5Q16718 116 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 SSX9Q7RTT3 188 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 VKORC1L1Q8N0U8 176 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 BSCL2Q96G97 398 aaPredicted RBP18.61■□□□□ 0.57
PTX3-201ENST00000295927 LYRM2Q9NU23 88 aaPredicted RBP18.61■□□□□ 0.57
PTX3-201ENST00000295927 FBXL17Q9UF56 701 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 FAM208BQ5VWN6 2430 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 FAM90A26D6RGX4 464 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 TAAR5O14804 337 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 PDLIM4P50479 330 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 ZNF137PP52743 207 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 FAM71F2Q6NXP2 309 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 ZNF295-AS1Q8N0V1 137 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 Q8N7P7 452 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 TNFRSF14Q92956 283 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 RBMXL1Q96E39 390 aaKnown RBP18.61■□□□□ 0.57
PTX3-201ENST00000295927 SLC35D1Q9NTN3 355 aa18.61■□□□□ 0.57
PTX3-201ENST00000295927 LRRK2Q5S007 2527 aa18.6■□□□□ 0.57
PTX3-201ENST00000295927 ATP6V1G1O75348 118 aa18.6■□□□□ 0.57
PTX3-201ENST00000295927 OR9G9P0C7N8 305 aa18.6■□□□□ 0.57
PTX3-201ENST00000295927 REG1BP48304 166 aa18.6■□□□□ 0.57
PTX3-201ENST00000295927 ERVK-16P61578 105 aa18.6■□□□□ 0.57
PTX3-201ENST00000295927 ARF6P62330 175 aa18.6■□□□□ 0.57
PTX3-201ENST00000295927 DIAPH2-AS1Q14236 149 aa18.6■□□□□ 0.57
PTX3-201ENST00000295927 STOML3Q8TAV4 291 aa18.6■□□□□ 0.57
PTX3-201ENST00000295927 SCARB1Q8WTV0 552 aa18.6■□□□□ 0.57
PTX3-201ENST00000295927 RAB40CQ96S21 281 aa18.6■□□□□ 0.57
PTX3-201ENST00000295927 CLEC7AQ9BXN2 247 aa18.6■□□□□ 0.57
PTX3-201ENST00000295927 SMIM3Q9BZL3 60 aa18.6■□□□□ 0.57
PTX3-201ENST00000295927 HSPB7Q9UBY9 170 aa18.6■□□□□ 0.57
PTX3-201ENST00000295927 CHD6Q8TD26 2715 aa18.59■□□□□ 0.57
PTX3-201ENST00000295927 IGSF23A1L1A6 192 aa18.59■□□□□ 0.57
PTX3-201ENST00000295927 EWSR1Q01844 656 aaKnown RBP eCLIP18.59■□□□□ 0.57
PTX3-201ENST00000295927 NHLH2Q02577 135 aa18.59■□□□□ 0.57
PTX3-201ENST00000295927 TNFRSF9Q07011 255 aa18.59■□□□□ 0.57
PTX3-201ENST00000295927 RTL8BQ17RB0 113 aa18.59■□□□□ 0.57
PTX3-201ENST00000295927 IGLV1-47P01700 117 aa18.59■□□□□ 0.57
PTX3-201ENST00000295927 ZFP36P26651 326 aaKnown RBP18.59■□□□□ 0.57
PTX3-201ENST00000295927 PRRX1P54821 245 aa18.59■□□□□ 0.57
PTX3-201ENST00000295927 FAM90A9PA6NNJ1 464 aa18.58■□□□□ 0.56
PTX3-201ENST00000295927 IAPPP10997 89 aa18.58■□□□□ 0.56
PTX3-201ENST00000295927 TPT1P13693 172 aaKnown RBP18.58■□□□□ 0.56
PTX3-201ENST00000295927 COX7A1P24310 79 aa18.58■□□□□ 0.56
PTX3-201ENST00000295927 IL3RAP26951 378 aa18.58■□□□□ 0.56
PTX3-201ENST00000295927 UBE2KP61086 200 aa18.58■□□□□ 0.56
PTX3-201ENST00000295927 RPL7L1Q6DKI1 246 aaKnown RBP18.58■□□□□ 0.56
PTX3-201ENST00000295927 TMEM252Q8N6L7 170 aa18.58■□□□□ 0.56
PTX3-201ENST00000295927 CLDND2Q8NHS1 167 aa18.58■□□□□ 0.56
PTX3-201ENST00000295927 SLC25A31Q9H0C2 315 aa18.58■□□□□ 0.56
PTX3-201ENST00000295927 M0R1W7 72 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 RBMXL2O75526 392 aaKnown RBP18.57■□□□□ 0.56
PTX3-201ENST00000295927 LMO4P61968 165 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 RPL23AP62750 156 aaKnown RBP18.57■□□□□ 0.56
PTX3-201ENST00000295927 HLA-DRB5Q30154 266 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 DHRS7BQ6IAN0 325 aaPredicted RBP18.57■□□□□ 0.56
PTX3-201ENST00000295927 OR5AN1Q8NGI8 311 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 NABP2Q9BQ15 211 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 GSX2Q9BZM3 304 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 RBKSQ9H477 322 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 TMEM140Q9NV12 185 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 WSB1Q9Y6I7 421 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 RPS10-NUDT3A0A1W2PQS6 291 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 H0YJW9 148 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 APOA2P02652 100 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 IGKV1-16P04430 117 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 BAP18Q8IXM2 172 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 BEND2Q8NDZ0 799 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 OR13D1Q8NGV5 346 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 PCNPQ8WW12 178 aaKnown RBP18.57■□□□□ 0.56
PTX3-201ENST00000295927 RHOVQ96L33 236 aa18.57■□□□□ 0.56
PTX3-201ENST00000295927 H3BP45 60 aa18.56■□□□□ 0.56
PTX3-201ENST00000295927 ARHGDIBP52566 201 aa18.56■□□□□ 0.56
PTX3-201ENST00000295927 OR2B8PP59922 312 aa18.56■□□□□ 0.56
PTX3-201ENST00000295927 TAGLNQ01995 201 aaKnown RBP18.56■□□□□ 0.56
PTX3-201ENST00000295927 TGIF2LXQ8IUE1 241 aa18.56■□□□□ 0.56
PTX3-201ENST00000295927 PHYHIPLQ96FC7 376 aa18.56■□□□□ 0.56
PTX3-201ENST00000295927 SMIM8Q96KF7 97 aa18.56■□□□□ 0.56
PTX3-201ENST00000295927 MED6O75586 246 aa18.55■□□□□ 0.56
PTX3-201ENST00000295927 HRASP01112 189 aa18.55■□□□□ 0.56
PTX3-201ENST00000295927 RRASP10301 218 aa18.55■□□□□ 0.56
PTX3-201ENST00000295927 ATP5J2P56134 94 aa18.55■□□□□ 0.56
PTX3-201ENST00000295927 CLLU1Q5K131 121 aa18.55■□□□□ 0.56
PTX3-201ENST00000295927 PNKDQ8N490 385 aa18.55■□□□□ 0.56
PTX3-201ENST00000295927 OR4A16Q8NH70 328 aa18.55■□□□□ 0.56
PTX3-201ENST00000295927 NRGNQ92686 78 aa18.55■□□□□ 0.56
PTX3-201ENST00000295927 QTRT1Q9BXR0 403 aaKnown RBP18.55■□□□□ 0.56
PTX3-201ENST00000295927 WFDC1Q9HC57 220 aa18.55■□□□□ 0.56
PTX3-201ENST00000295927 SIRT7Q9NRC8 400 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms