RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 TRAPPC2LQ9UL33 140 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 VPS13AQ96RL7 3174 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 TRAV30A0A087WSZ9 112 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 GAGE12BA1L429 117 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 M0R1X1 148 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 CA1P00915 261 aaPredicted RBP8.62□□□□□ -1.03
CLDN1-201ENST00000295522 CA2P00918 260 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 MYF5P13349 255 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 CAPZBP47756 277 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 FASLGP48023 281 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 OR8B8Q15620 311 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 RSPO1Q2MKA7 263 aaPredicted RBP8.62□□□□□ -1.03
CLDN1-201ENST00000295522 FGFRL1Q8N441 504 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 ABHD3Q8WU67 409 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 GMPPAQ96IJ6 420 aaPredicted RBP8.62□□□□□ -1.03
CLDN1-201ENST00000295522 MCRIP2Q9BUT9 160 aaKnown RBP8.62□□□□□ -1.03
CLDN1-201ENST00000295522 IL36BQ9NZH7 164 aa8.62□□□□□ -1.03
CLDN1-201ENST00000295522 CAMPP49913 170 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 PMCHL1Q16048 86 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 OR52L2PQ8NGH6 319 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 OR1F12Q8NHA8 337 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 CHD9Q3L8U1 2897 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 MUC21A0A0G2JKD1 596 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 MUC21A0A140T8X8 626 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 A0A1W2PN81 502 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 GNG7O60262 68 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 CA6P23280 308 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 CA7P43166 264 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 MUC21Q5SSG8 566 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 ZNF324BQ6AW86 544 aaPredicted RBP8.61□□□□□ -1.03
CLDN1-201ENST00000295522 CD207Q9UJ71 328 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 WDFY3Q8IZQ1 3526 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 CLDN14O95500 239 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 IGKV1-39P01597 117 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 IGKV1D-39P04432 117 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 FABP6P51161 128 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 YPEL3P61236 119 aaPredicted RBP8.61□□□□□ -1.03
CLDN1-201ENST00000295522 IGFBP7Q16270 282 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 LTC4SQ16873 150 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 CENPVQ7Z7K6 275 aaPredicted RBP8.61□□□□□ -1.03
CLDN1-201ENST00000295522 SSBP3Q9BWW4 388 aaPredicted RBP8.61□□□□□ -1.03
CLDN1-201ENST00000295522 ZNF331Q9NQX6 463 aaPredicted RBP8.61□□□□□ -1.03
CLDN1-201ENST00000295522 CLEC5AQ9NY25 188 aa8.61□□□□□ -1.03
CLDN1-201ENST00000295522 IGHV1-69-2A0A0G2JMI3 117 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 HSBP1L1C9JCN9 74 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 IGLL1P15814 213 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 KIR2DL1P43626 348 aaPredicted RBP8.6□□□□□ -1.03
CLDN1-201ENST00000295522 PPOXP50336 477 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 TRIM61Q5EBN2 209 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 C20orf204Q6ZNR8 217 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 STPG3Q8N7X2 389 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 LIN7CQ9NUP9 197 aaKnown RBP8.6□□□□□ -1.03
CLDN1-201ENST00000295522 FBLL1A6NHQ2 334 aaKnown RBP8.6□□□□□ -1.03
CLDN1-201ENST00000295522 MLNRO43193 412 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 CTXN2P0C2S0 81 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 GPR6P46095 362 aaPredicted RBP8.6□□□□□ -1.03
CLDN1-201ENST00000295522 PRRX1P54821 245 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 TMEM92Q6UXU6 159 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 VASH2Q86V25 355 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 OR2T6Q8NHC8 308 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 PMCHL2Q9BQD1 86 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 HINT2Q9BX68 163 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 REV3LO60673 3130 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 A0A1W2PQF6 199 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 OR5B21A6NL26 309 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 ZIC3O60481 467 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 TOMM40O96008 361 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 CTRLP40313 264 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 GNG4P50150 75 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 PRDX4Q13162 271 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 MIC13Q5XKP0 118 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 KIAA0895LQ68EN5 471 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 OR8B2Q96RD0 313 aa8.6□□□□□ -1.03
CLDN1-201ENST00000295522 CELSR3Q9NYQ7 3312 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 hDV102S1A0JD36 115 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 SYNGR1O43759 233 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 RAMP3O60896 148 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 USF1P22415 310 aaPredicted RBP8.59□□□□□ -1.03
CLDN1-201ENST00000295522 PQLC2Q6ZP29 291 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 OR5A2Q8NGI9 324 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 OR1L3Q8NH93 324 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 SMIM12Q96EX1 92 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 KCNIP2Q9NS61 270 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 IL36GQ9NZH8 169 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 A0A096LPE4 126 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 A0A1W2PPZ6 126 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 NPIPB13A6NJU9 1138 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 NPIPB4C9JG80 1138 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 APCSP02743 223 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 PPBPP02775 128 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 MRPL21Q7Z2W9 205 aaKnown RBP8.59□□□□□ -1.03
CLDN1-201ENST00000295522 CHRDL1Q9BU40 450 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 FNDC4Q9H6D8 234 aaPredicted RBP8.59□□□□□ -1.03
CLDN1-201ENST00000295522 PLEKHA3Q9HB20 300 aa8.59□□□□□ -1.03
CLDN1-201ENST00000295522 YLPM1P49750 1951 aaKnown RBP8.59□□□□□ -1.03
CLDN1-201ENST00000295522 GAGE10A6NGK3 116 aa8.59□□□□□ -1.04
CLDN1-201ENST00000295522 TNFSF11O14788 317 aa8.59□□□□□ -1.04
CLDN1-201ENST00000295522 OR7C2O60412 319 aa8.59□□□□□ -1.04
CLDN1-201ENST00000295522 SELENOVP59797 346 aa8.59□□□□□ -1.04
CLDN1-201ENST00000295522 WDR74Q6RFH5 385 aaPredicted RBP8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms