RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 FAM90A5PA8MXJ8 464 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM90A23PA8MXZ1 464 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 CEACAM4O75871 244 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 CD74P04233 296 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM90A15PP0C7V4 464 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM90A13PP0C7W8 464 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM90A14PP0C7W9 464 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM90A24PP0C7X0 464 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 GLIPR1P48060 266 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 RPS11P62280 158 aaKnown RBP eCLIP10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 DGAT2L7PQ6IED9 249 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 SMIM12Q96EX1 92 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 CLN8Q9UBY8 286 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 TGIF2-C20orf24A0A0A6YYL0 155 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM90A26D6RGX4 464 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 GNG7O60262 68 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 LYZL6O75951 148 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 TRGC1P0CF51 173 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 PPP1CCP36873 323 aaKnown RBP10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 PLP1P60201 277 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FAM27BQ5VT28 67 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 TMEM108Q6UXF1 575 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 CD40P25942 277 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 TEX30Q5JUR7 227 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 LEMD1Q68G75 181 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 FLYWCH2Q96CP2 140 aaKnown RBP10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 RBM14Q96PK6 669 aaKnown RBP10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 MRPL37Q9BZE1 423 aaKnown RBP10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 PXMP4Q9Y6I8 212 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 SDK2Q58EX2 2172 aa10.18□□□□□ -0.78
SYNGAP1-201ENST00000293748 RAB29O14966 203 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 TNFSF10P50591 281 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 PQLC2Q6ZP29 291 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 OR2M3Q8NG83 312 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 SNRNP40Q96DI7 357 aaKnown RBP10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 RASL11BQ9BPW5 248 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 TMEM238LA0A1B0GVL6 79 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 A6NJY4 79 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 J3QR06 171 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 HPRT1P00492 218 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 IGHV3-13P01766 116 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 IGHV3-7P01780 117 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 SLC25A34Q6PIV7 304 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 WNT2BQ93097 391 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 HARBI1Q96MB7 349 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 PAXXQ9BUH6 204 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 SCN3AQ9NY46 2000 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 TRBV23-1A0A0A0MS06 115 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 SH2D7A6NKC9 451 aaPredicted RBP10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 AGAP20933 346 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 SPINK14Q6IE38 97 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 Q8WTZ3 238 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 ONECUT1Q9UBC0 465 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 LOC105371267A0A1B0GV96 52 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 ZNF137PP52743 207 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 SELENOTP62341 195 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 AESQ08117 197 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 IBA57Q5T440 356 aaKnown RBP10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 Q6ZS92 163 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 SSX8Q7RTT4 187 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 OR8I2Q8N0Y5 310 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 TINAGQ9UJW2 476 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 FZR1Q9UM11 496 aa10.17□□□□□ -0.78
SYNGAP1-201ENST00000293748 OR4A8P0C604 315 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 FGF12P61328 243 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 FUT5Q11128 374 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 TGIF2LYQ8IUE0 185 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 C9orf40Q8IXQ3 194 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 MRPL18Q9H0U6 180 aaKnown RBP10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 FBLL1A6NHQ2 334 aaKnown RBP10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 TMEM250H0YL14 139 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 LEPROTL1O95214 131 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 GBGT1Q8N5D6 347 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 PRF1P14222 555 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 NMUP48645 174 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 CXorf66Q5JRM2 361 aaPredicted RBP10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 CCL17Q92583 94 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 C5orf66Q9H5L9 145 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 CBLN4Q9NTU7 201 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 IGLV1-36A0A0B4J1U3 117 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 TRBV9A0A0B4J1U6 114 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 A0A1B0GV90 55 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 A0A1W2PP11 408 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 IGKV3-11P04433 115 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 BTF3P20290 206 aaKnown RBP10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 CLDN18P56856 261 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 WDR25Q64LD2 544 aaPredicted RBP10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 TMEM183AQ8IXX5 376 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 POC1AQ8NBT0 407 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 OR8G5Q8NG78 346 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 TMEM45BQ96B21 275 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 AMELYQ99218 206 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 DTX4Q9Y2E6 619 aa10.16□□□□□ -0.78
SYNGAP1-201ENST00000293748 TRAV39A0A0B4J263 110 aa10.15□□□□□ -0.78
SYNGAP1-201ENST00000293748 KBTBD11O94819 623 aa10.15□□□□□ -0.78
SYNGAP1-201ENST00000293748 IGKV1D-16P01601 117 aa10.15□□□□□ -0.78
SYNGAP1-201ENST00000293748 COX7A1P24310 79 aa10.15□□□□□ -0.78
SYNGAP1-201ENST00000293748 XIRP2A4UGR9 3374 aa10.15□□□□□ -0.78
SYNGAP1-201ENST00000293748 TRGV8A0A0C4DH27 118 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms